RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CRYZL1O95825 349 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 SERPING1P05155 500 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 GAP43P17677 238 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 EPS15P42566 896 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 KPNA1P52294 538 aaPredicted RBP9.15□□□□□ -0.95
ATG4A-203ENST00000372232 AQP4P55087 323 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 CD300CQ08708 224 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 RASA2Q15283 850 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 C4orf46Q504U0 113 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 C2orf27AQ580R0 203 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 TDRD12Q587J7 1177 aaKnown RBP9.15□□□□□ -0.95
ATG4A-203ENST00000372232 AGAP9Q5VTM2 703 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 MIER3Q7Z3K6 550 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 PLD4Q96BZ4 506 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 PLEKHA8Q96JA3 519 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 FBXL18Q96ME1 805 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 OLFM1Q99784 485 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 GANQ9H2C0 597 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 C12orf10Q9HB07 376 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 GRHL1Q9NZI5 618 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 MAP4K5Q9Y4K4 846 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 ACTL7BQ9Y614 415 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 ASTN1O14525 1302 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 SPAG7O75391 227 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 GCNT3O95395 438 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PF4P02776 101 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 NR3C1P04150 777 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 ARP10275 920 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 RARBP10826 455 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 LMNB1P20700 586 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PGM1P36871 562 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PLTPP55058 493 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 DR1Q01658 176 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 TUBA3CQ13748 450 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 MTERF2Q49AM1 385 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 CDONQ4KMG0 1287 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 FAM117BQ6P1L5 589 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 B3GNT9Q6UX72 402 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 RIPOR1Q6ZS17 1223 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 C11orf96Q7Z7L8 435 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 DHDDSQ86SQ9 333 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 MTDHQ86UE4 582 aaKnown RBP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 SLC38A6Q8IZM9 456 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 LRRC57Q8N9N7 239 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 EXD1Q8NHP7 514 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 CCDC138Q96M89 665 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 TTC1Q99614 292 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF577Q9BSK1 485 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 LATS2Q9NRM7 1088 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 GNPTGQ9UJJ9 305 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 HEMK1Q9Y5R4 338 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 EIF3DO15371 548 aaKnown RBP eCLIP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 SLC16A3O15427 465 aaKnown RBP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PEX1O43933 1283 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 TNFAIP8O95379 198 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 KRT75O95678 551 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 BAG2O95816 211 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 S1PR4O95977 384 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 ICAM1P05362 532 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 FGFR4P22455 802 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 CETN2P41208 172 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 GRM5P41594 1212 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 DHX34Q14147 1143 aaKnown RBP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PCSK7Q16549 785 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 C6orf163Q5TEZ5 329 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 DPY19L2P1Q6NXN4 242 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 NLRX1Q86UT6 975 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 MYCT1Q8N699 235 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 LILRB1Q8NHL6 650 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 ATL1Q8WXF7 558 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PANX3Q96QZ0 392 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 PSD2Q9BQI7 771 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 ZNF341Q9BYN7 854 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 WDR11Q9BZH6 1224 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 CHRDQ9H2X0 955 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 MYOZ2Q9NPC6 264 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 IGSF9Q9P2J2 1179 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 WRAP73Q9P2S5 460 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-203ENST00000372232 NEU2Q9Y3R4 380 aa9.14□□□□□ -0.95
ATG4A-203ENST00000372232 HAT1O14929 419 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TGFB1I1O43294 461 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 FKBP9O95302 570 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CYP1A2P05177 515 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 DDX5P17844 614 aaKnown RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 ITGB5P18084 799 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 PON1P27169 355 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 CASP4P49662 377 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 FOLH1Q04609 750 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 DNAJC3Q13217 504 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 SNAPC2Q13487 334 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 RAPGEF1Q13905 1077 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 PDE1CQ14123 709 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-203ENST00000372232 EPHA7Q15375 998 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 LONRF1Q17RB8 773 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 C4orf22Q6V702 233 aa9.13□□□□□ -0.95
ATG4A-203ENST00000372232 TRMT10CQ7L0Y3 403 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms