RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TREML2Q5T2D2 321 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 ARMC6Q6NXE6 501 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 CAVIN3Q969G5 261 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 YIPF2Q9BWQ6 316 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 FRMD8Q9BZ67 464 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 LATS2Q9NRM7 1088 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 TFR2Q9UP52 801 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PTPN11Q06124 597 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 NT5DC4Q86YG4 428 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 SLC13A5Q86YT5 568 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 STX19Q8N4C7 294 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 CHORDC1Q9UHD1 332 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 TMEM150BA6NC51 233 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 LSM8O95777 96 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 FBXW4P57775 412 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 LRRC49Q8IUZ0 686 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 FBXO44Q9H4M3 255 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 IGFLR1Q9H665 355 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PCDHGB4Q9UN71 923 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 M0R3G1 203 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 MRPS6P82932 125 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 TIGD7Q6NT04 549 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 LRRC39Q96DD0 335 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 KLF6Q99612 283 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PRPF18Q99633 342 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM118BQ9BPY3 351 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 SCUBE2Q9NQ36 999 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 NFASCO94856 1347 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 FRMPD4Q14CM0 1322 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 LACTBL1A8MY62 500 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 POLBP06746 335 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 KCNJ1P48048 391 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZNF507Q8TCN5 953 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 ACSF2Q96CM8 615 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZSWIM1Q9BR11 485 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 MROH7Q68CQ1 1323 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 CYTH3O43739 400 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 SYNCRIPO60506 623 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 HMOX2P30519 316 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 CPA2P48052 419 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 GEMP55040 296 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 PDK2Q15119 407 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM172AQ8WUF8 416 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 C19orf60Q96EN9 201 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZSCAN9O15535 394 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 RBP3P10745 1247 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 RGS4P49798 205 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 EPS8L3Q8TE67 593 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 HTATIP2Q9BUP3 242 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 EURLQ9NYK6 297 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 CRLS1Q9UJA2 301 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 PRR23AA6NEV1 266 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 PTGER2P43116 358 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 FUCA2Q9BTY2 467 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 HAO1Q9UJM8 370 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 UMODL1Q5DID0 1318 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 AKAP3O75969 853 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 RHOCP08134 193 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 BTKQ06187 659 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 BNIP1Q12981 228 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 C18orf25Q96B23 403 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 DCLRE1BQ9H816 532 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 SCN3BQ9NY72 215 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 VPS28Q9UK41 221 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 EML1O00423 815 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 CLASP2O75122 1294 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 ATP6V1G2O95670 118 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 TTI2Q6NXR4 508 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 ACTRT1Q8TDG2 376 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 SMARCD1Q96GM5 515 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 INTS13Q9NVM9 706 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 WHRNQ9P202 907 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 HEY2Q9UBP5 337 aa13.68□□□□□ -0.22
RAPGEF1-201ENST00000372189 TNFRSF21O75509 655 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 FDFT1P37268 417 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 C15orf59Q2T9L4 293 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 ITFG2Q969R8 447 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 GOLPH3Q9H4A6 298 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 UXTQ9UBK9 157 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PPIDQ08752 370 aaKnown RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 DGKZQ13574 1117 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 PTK6Q13882 451 aa13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 TTC33Q6PID6 262 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF1-201ENST00000372189 CCDC60Q8IWA6 550 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms