RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PWWP2AQ96N64 755 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 MIPEPQ99797 713 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 VPS37BQ9H9H4 285 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 RPF1Q9H9Y2 349 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 MIOSQ9NXC5 875 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 CPSF3Q9UKF6 684 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 ANGPTL2Q9UKU9 493 aa11.89□□□□□ -0.51
TSPAN1-201ENST00000372003 KLF11O14901 512 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 GYG2O15488 501 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 MAP3K7O43318 606 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 EXTL3O43909 919 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 ENTPD5O75356 428 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 DHRS4L1P0CG22 281 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 VPS41P49754 854 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 ARFIP2P53365 341 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 CLDN10P78369 228 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 HTRA4P83105 476 aaPredicted RBP11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 CYP24A1Q07973 514 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 SLC10A6Q3KNW5 377 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 NOMO2Q5JPE7 1267 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 SPOUT1Q5T280 376 aaKnown RBP11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 C15orf39Q6ZRI6 1047 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 MTDHQ86UE4 582 aaKnown RBP11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 TRIM42Q8IWZ5 723 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 URGCPQ8TCY9 931 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 TAS1R2Q8TE23 839 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 GATA6Q92908 595 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 STMN2Q93045 179 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 MANSC1Q9H8J5 431 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 TOPORSQ9NS56 1045 aaPredicted RBP11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 IL1RAPL1Q9NZN1 696 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 RABGEF1Q9UJ41 708 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 MSRAQ9UJ68 235 aa11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 YBX2Q9Y2T7 364 aaKnown RBP11.88□□□□□ -0.51
TSPAN1-201ENST00000372003 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 LACTBL1A8MY62 500 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 E7ESA3 106 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 PDLIM1O00151 329 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 CA3P07451 260 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 PDHA1P08559 390 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 KRT5P13647 590 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 KRT4P19013 534 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 RANBP2P49792 3224 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 ARSEP51690 589 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 VCPP55072 806 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 TAS2R40P59535 323 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 TAP1Q03518 808 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 MAMLD1Q13495 774 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 OASLQ15646 514 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 TBCCQ15814 346 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 KYAT1Q16773 422 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 SV2AQ7L0J3 742 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 C4orf33Q8N1A6 199 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 VPS52Q8N1B4 723 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 FIBCD1Q8N539 461 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 BANPQ8N9N5 519 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 GSTCDQ8NEC7 633 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 FEZF2Q8TBJ5 459 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 SCG3Q8WXD2 468 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 SLITRK1Q96PX8 696 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 HEMGNQ9BXL5 484 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 MAK16Q9BXY0 300 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 NKX2-4Q9H2Z4 354 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 ACSS3Q9H6R3 686 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 NPHS2Q9NP85 383 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 ACP6Q9NPH0 428 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 PARVAQ9NVD7 372 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 RBAKQ9NYW8 714 aaPredicted RBP11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 DLGAP2Q9P1A6 1054 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 KANSL3Q9P2N6 904 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 C2CD2Q9Y426 696 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 PCDHA11Q9Y5I1 949 aa11.87□□□□□ -0.51
TSPAN1-201ENST00000372003 PTGESO14684 152 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ARHGEF15O94989 841 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ARL4CP56559 192 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 NOMO3P69849 1222 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ADCY1Q08828 1119 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 GPS1Q13098 491 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 RCN2Q14257 317 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 RCN1Q15293 331 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 HIF1AQ16665 826 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SLC5A9Q2M3M2 681 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 LRIT3Q3SXY7 679 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ACSBG2Q5FVE4 666 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 WDR44Q5JSH3 913 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 ZNF280BQ86YH2 543 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 PPIL6Q8IXY8 311 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 CMTR2Q8IYT2 770 aaKnown RBP11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 TTC13Q8NBP0 860 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 MZB1Q8WU39 189 aa11.86□□□□□ -0.51
TSPAN1-201ENST00000372003 SNX27Q96L92 541 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms