RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 RUVBL2Q9Y230 463 aaKnown RBP15.14■□□□□ 0.01
NDC1-201ENST00000371429 UBR1Q8IWV7 1749 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 TP53BP2Q13625 1128 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 PHKG1Q16816 387 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 EEF1DP3Q658K8 133 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 SLAIN1Q8ND83 568 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 HTR3CQ8WXA8 447 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 SKA1Q96BD8 255 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 CCDC126Q96EE4 140 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 FAM111AQ96PZ2 611 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 ZCWPW1Q9H0M4 648 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 AVENQ9NQS1 362 aaPredicted RBP15.14■□□□□ 0.01
NDC1-201ENST00000371429 FBXO10Q9UK96 956 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 PHF20L1A8MW92 1017 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 CAND2O75155 1236 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 KLHL2O95198 593 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 ADRB2P07550 413 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 MSH3P20585 1137 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 BCL2L1Q07817 233 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 GRIK3Q13003 919 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 PSMD5Q16401 504 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 DCLRE1AQ6PJP8 1040 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 GPAMQ9HCL2 828 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 ACOT9Q9Y305 439 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 MMP3P08254 477 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 GCKP35557 465 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 TNFSF9P41273 254 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 GLRBP48167 497 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 ACAP1Q15027 740 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 MTMR14Q8NCE2 650 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 B3GALNT2Q8NCR0 500 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 GLIS3Q8NEA6 775 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 HSFY1Q96LI6 401 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 ZCCHC2Q9C0B9 1178 aaKnown RBP15.14■□□□□ 0.01
NDC1-201ENST00000371429 ILKAPQ9H0C8 392 aaPredicted RBP15.14■□□□□ 0.01
NDC1-201ENST00000371429 TRHDEQ9UKU6 1024 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 PNMA8BQ9ULN7 279 aaPredicted RBP15.14■□□□□ 0.01
NDC1-201ENST00000371429 DYRK1BQ9Y463 629 aa15.14■□□□□ 0.01
NDC1-201ENST00000371429 ASTN2O75129 1339 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 SMIM35A0A1B0GVV1 85 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 DDX3XO00571 662 aaKnown RBP eCLIP15.13■□□□□ 0.014e-12■■■■■ 43.9
NDC1-201ENST00000371429 TRUB2O95900 331 aaKnown RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 ZNF135P52742 658 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 UGCGQ16739 394 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 OR9Q1Q8NGQ5 310 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 CASKIN2Q8WXE0 1202 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 KAT5Q92993 513 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 C18orf25Q96B23 403 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 GPR20Q99678 358 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 C2orf49Q9BVC5 232 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 WDR41Q9HAD4 459 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 SLC28A3Q9HAS3 691 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 CAPN10Q9HC96 672 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 C6orf203Q9P0P8 240 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 DCDC2Q9UHG0 476 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 USP15Q9Y4E8 981 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 ADGRB2O60241 1585 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 AIM2O14862 343 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 PCDH9Q9HC56 1237 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 SEPT3Q9UH03 358 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 TRPC5OSA6NMA1 111 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 ASGR1P07306 291 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 FGRP09769 529 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 HSD17B3P37058 310 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 NR2C2P49116 596 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 RTP1P59025 263 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 TRMT11Q7Z4G4 463 aaKnown RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 TUBGCP3Q96CW5 907 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 HES6Q96HZ4 224 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 CEP19Q96LK0 163 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 SHCBP1LQ9BZQ2 653 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 SFMBT1Q9UHJ3 866 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 DNMT3LQ9UJW3 386 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 MAGEB16A2A368 324 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 NT5C1B-RDH14C9J2C7 533 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 F8VP50 259 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 EFCAB14O75071 495 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 DUSP11O75319 330 aaKnown RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 TPH1P17752 444 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 POLR2LP62875 67 aaKnown RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 ARID3BQ8IVW6 561 aaPredicted RBP15.13■□□□□ 0.01
NDC1-201ENST00000371429 FBXO25Q8TCJ0 367 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 DNAJC19Q96DA6 116 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 GID8Q9NWU2 228 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 SUFUQ9UMX1 484 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 C3P01024 1663 aa15.13■□□□□ 0.01
NDC1-201ENST00000371429 ARF4P18085 180 aaPredicted RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 EEF1DP29692 281 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 GRM5P41594 1212 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 MFSD7Q6UXD7 560 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 PIGZQ86VD9 579 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 ST13P4Q8IZP2 240 aaPredicted RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.12■□□□□ 0.01
NDC1-201ENST00000371429 UTP6Q9NYH9 597 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 SCAMP3O14828 347 aaKnown RBP15.12■□□□□ 0.01
NDC1-201ENST00000371429 GJB6O95452 261 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 FGFR1P11362 822 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 RARGP13631 454 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 SOX11P35716 441 aa15.12■□□□□ 0.01
NDC1-201ENST00000371429 ACOX1Q15067 660 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms