RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SNF8Q96H20 258 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 SPATA17Q96L03 361 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 FMO2Q99518 471 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 SMOC2Q9H3U7 446 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 IL37Q9NZH6 218 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 NUDT5Q9UKK9 219 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 HEY1Q9Y5J3 304 aa17.44■□□□□ 0.38
PHGDH-202ENST00000369409 CARNS1A5YM72 827 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 MSI1O43347 362 aaKnown RBP17.43■□□□□ 0.38
PHGDH-202ENST00000369409 CREB3O43889 395 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 SYN1P17600 705 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 KLRC2P26717 231 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 GBP1P32455 592 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 PPM1AP35813 382 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 HTRA4P83105 476 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-202ENST00000369409 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 PSRC1Q6PGN9 363 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-202ENST00000369409 DDX53Q86TM3 631 aaKnown RBP17.43■□□□□ 0.38
PHGDH-202ENST00000369409 MON1AQ86VX9 555 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 CCDC89Q8N998 374 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 TSEN2Q8NCE0 465 aaKnown RBP17.43■□□□□ 0.38
PHGDH-202ENST00000369409 GIPC2Q8TF65 315 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 AUTS2Q8WXX7 1259 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 CASP10Q92851 521 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 RNF34Q969K3 372 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 ZBTB9Q96C00 473 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 ZBED2Q9BTP6 218 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 TKTL2Q9H0I9 626 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 WDCPQ9H6R7 721 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 RCOR3Q9P2K3 495 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-202ENST00000369409 SFMBT1Q9UHJ3 866 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 HPCAL4Q9UM19 191 aa17.43■□□□□ 0.38
PHGDH-202ENST00000369409 FAM92AA1XBS5 289 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 H3BRJ5 948 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 MAP3K6O95382 1288 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 RBP3P10745 1247 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 ETS1P14921 441 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 IVDP26440 423 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 ADCY8P40145 1251 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 GDF10P55107 478 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 CALCOCO2Q13137 446 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 ARL13BQ3SXY8 428 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 ZC3H18Q86VM9 953 aaKnown RBP17.42■□□□□ 0.38
PHGDH-202ENST00000369409 VPS52Q8N1B4 723 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 ARHGAP18Q8N392 663 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 FIBCD1Q8N539 461 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 ARHGEF4Q9NR80 690 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 AAASQ9NRG9 546 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 AFF4Q9UHB7 1163 aaKnown RBP17.42■□□□□ 0.38
PHGDH-202ENST00000369409 MFHAS1Q9Y4C4 1052 aa17.42■□□□□ 0.38
PHGDH-202ENST00000369409 EEF2KO00418 725 aaKnown RBP17.41■□□□□ 0.38
PHGDH-202ENST00000369409 IFNB1P01574 187 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 ZSCAN5DPP0CG00 497 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 AMPD1P23109 780 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 NCBP2-AS2Q69YL0 99 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 B4GALNT4Q76KP1 1039 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 ART4Q93070 314 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 ETNK2Q9NVF9 386 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 WHRNQ9P202 907 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 PCDHB12Q9Y5F1 795 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 SLC38A8A6NNN8 435 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 FAM72CH0Y354 149 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 GBE1Q04446 702 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 TAF10Q12962 218 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 FAM72AQ5TYM5 149 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 FAM72DQ6L9T8 149 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 FAM72BQ86X60 149 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 RSAD2Q8WXG1 361 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 VIPAS39Q9H9C1 493 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 PCDH9Q9HC56 1237 aa17.41■□□□□ 0.38
PHGDH-202ENST00000369409 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
PHGDH-202ENST00000369409 LAMA2P24043 3122 aaKnown RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 H7C0C1 242 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 FGF18O76093 207 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 SEC24AO95486 1093 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 LINC00271P0C7V0 271 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 ZFXP17010 805 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 GGCXP38435 758 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 HSPA9P38646 679 aaKnown RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 ATP5OP48047 213 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 ITGA8P53708 1063 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 SEMA3BQ13214 749 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 EIF4EBP2Q13542 120 aaPredicted RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 P3H1Q32P28 736 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 MSANTD2Q6P1R3 559 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 TMC3Q7Z5M5 1100 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 UNC45BQ8IWX7 931 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 MREGQ8N565 214 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 ZNF461Q8TAF7 563 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 CCHCR1Q8TD31 782 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 TLR8Q9NR97 1041 aaKnown RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 MTRF1LQ9UGC7 380 aaKnown RBP17.4■□□□□ 0.38
PHGDH-202ENST00000369409 INSL6Q9Y581 213 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 SNX10Q9Y5X0 201 aa17.4■□□□□ 0.38
PHGDH-202ENST00000369409 TP73O15350 636 aa17.39■□□□□ 0.38
PHGDH-202ENST00000369409 MFSD11O43934 449 aa17.39■□□□□ 0.38
PHGDH-202ENST00000369409 ABLIM3O94929 683 aa17.39■□□□□ 0.38
PHGDH-202ENST00000369409 TUFMP49411 452 aaKnown RBP17.39■□□□□ 0.38
PHGDH-202ENST00000369409 TPI1P60174 286 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms