RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 ZCCHC23Q6ZST2 131 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 RUBCNQ92622 972 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 CRYL1Q9Y2S2 319 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 PLEKHA7Q6IQ23 1121 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 FOXR1Q6PIV2 292 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 C6orf62Q9GZU0 229 aaPredicted RBP18.63■□□□□ 0.57
SNX27-202ENST00000368841 NMRK1Q9NWW6 199 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 HLA-DQA2P01906 255 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 RASA2Q15283 850 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 ILDR2Q71H61 639 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 C16orf62Q7Z3J2 963 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 PALB2Q86YC2 1186 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 TMEM79Q9BSE2 394 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 KLHL25Q9H0H3 589 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 ABCG8Q9H221 673 aa18.63■□□□□ 0.57
SNX27-202ENST00000368841 CDC42EP4Q9H3Q1 356 aaKnown RBP18.63■□□□□ 0.57
SNX27-202ENST00000368841 EGFRP00533 1210 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 IRAK1P51617 712 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 PSMC6P62333 389 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 MAPK7Q13164 816 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 PKN1Q16512 942 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 GLT6D1Q7Z4J2 308 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 ARHGEF19Q8IW93 802 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 WDR36Q8NI36 951 aaKnown RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 GRIN3AQ8TCU5 1115 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 ADGRE3Q9BY15 652 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 TLR8Q9NR97 1041 aaKnown RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 RBM22Q9NW64 420 aaKnown RBP eCLIP18.62■□□□□ 0.57
SNX27-202ENST00000368841 SPATA2Q9UM82 520 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 GRK4P32298 578 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 NAMPTP43490 491 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 SLC1A6P48664 564 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 SLC39A12Q504Y0 691 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 EFL1Q7Z2Z2 1120 aaKnown RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 FAM120BQ96EK7 910 aaKnown RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 SERPINB12Q96P63 405 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 TMEM237Q96Q45 408 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 TBCDQ9BTW9 1192 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 DUSP12Q9UNI6 340 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 TRIM13O60858 407 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 USP17L7P0C7H9 530 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 SLC30A9Q6PML9 568 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 MAGEB18Q96M61 343 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 FHDC1Q9C0D6 1143 aaPredicted RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 SEPT3Q9UH03 358 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 PCDHB12Q9Y5F1 795 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 ABCC3O15438 1527 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 ALDH2P05091 517 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 IRX1P78414 480 aaPredicted RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 CYP20A1Q6UW02 462 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 FNDC5Q8NAU1 212 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 CERKQ8TCT0 537 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 UBXN6Q9BZV1 441 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 POLR1DQ9Y2S0 133 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 CHD1O14646 1710 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 NDST1P52848 882 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 NCF4Q15080 339 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 LGI2Q8N0V4 545 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 CGRRF1Q99675 332 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 PLA2G12BQ9BX93 195 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 AMPD1P23109 780 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 FBXO33Q7Z6M2 555 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 SETD3Q86TU7 594 aaPredicted RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 RNASE11Q8TAA1 199 aaKnown RBP18.62■□□□□ 0.57
SNX27-202ENST00000368841 USP7Q93009 1102 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 SH3GL1Q99961 368 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 EMILIN2Q9BXX0 1053 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
SNX27-202ENST00000368841 FOXP2O15409 715 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 NUP62P37198 522 aaPredicted RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 BEX3Q00994 111 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 CYP24A1Q07973 514 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 TBCELQ5QJ74 424 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 NOL9Q5SY16 702 aaKnown RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 C19orf18Q8NEA5 215 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 OLFM1Q99784 485 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 PRKAG3Q9UGI9 489 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 PDHXO00330 501 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 GRIK4Q16099 956 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 CYP2R1Q6VVX0 501 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 REXO4Q9GZR2 422 aaKnown RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 LRRC40Q9H9A6 602 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 GBA2Q9HCG7 927 aaPredicted RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 SPATA31A1Q5TZJ5 1347 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 IQSEC2Q5JU85 1478 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 TRPM1Q7Z4N2 1603 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 MTSS1O43312 755 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 NQO1P15559 274 aaKnown RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 STX5Q13190 355 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 ATP1A4Q13733 1029 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 RABL6Q3YEC7 729 aaPredicted RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 APBA2Q99767 749 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 RIBC2Q9H4K1 309 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 ABCA8O94911 1581 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 TUBP50607 506 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 STYK1Q6J9G0 422 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 TMEM26Q6ZUK4 368 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 PRCCQ92733 491 aaPredicted RBP18.61■□□□□ 0.57
SNX27-202ENST00000368841 SHOC2Q9UQ13 582 aa18.61■□□□□ 0.57
SNX27-202ENST00000368841 TK2O00142 265 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms