RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
SNX27-201ENST00000368838 DENND1BQ6P3S1 775 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 SCARA5Q6ZMJ2 495 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 MMS22LQ6ZRQ5 1243 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 TPRG1Q6ZUI0 275 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 TTC30AQ86WT1 665 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 METTL23Q86XA0 190 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 KATNAL2Q8IYT4 538 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 MAML2Q8IZL2 1156 aaPredicted RBP9.19□□□□□ -0.94
SNX27-201ENST00000368838 SPATA4Q8NEY3 305 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 ZNF461Q8TAF7 563 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 MAIP1Q8WWC4 291 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX27-201ENST00000368838 UBXN4Q92575 508 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 GOLGA1Q92805 767 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 ELMO3Q96BJ8 720 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 FUBP3Q96I24 572 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX27-201ENST00000368838 ZSWIM3Q96MP5 696 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 PGLYRP2Q96PD5 576 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 CPXM1Q96SM3 734 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 C11orf70Q9BRQ4 267 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 CARD6Q9BX69 1037 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 PRDM16Q9HAZ2 1276 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 HEBP1Q9NRV9 189 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX27-201ENST00000368838 HSFX1Q9UBD0 423 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 CYTH4Q9UIA0 394 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNX27-201ENST00000368838 INSL5Q9Y5Q6 135 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 M0QYV0 167 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ABLIM3O94929 683 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 FBXO21O94952 628 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 CLSTN1O94985 981 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 LMNAP02545 664 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 FBXO45P0C2W1 286 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 CPB1P15086 417 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 COMTP21964 271 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 MCM3P25205 808 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 LMO2P25791 158 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 TARSP26639 723 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 VIPR2P41587 438 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 PTPN9P43378 593 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ID4P47928 161 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ZNF143P52747 638 aaPredicted RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 RWDD2BP57060 319 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ADCY1Q08828 1119 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 TWF1Q12792 350 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 NFE2Q16621 373 aaPredicted RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 CYP1B1Q16678 543 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 INTS6LQ5JSJ4 861 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 RAB41Q5JT25 222 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 FAM78AQ5JUQ0 283 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 PRSS36Q5K4E3 855 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 WSCD1Q658N2 575 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 SLC8B1Q6J4K2 584 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 WDR93Q6P2C0 686 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 DNAJC24Q6P3W2 148 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 DSTYKQ6XUX3 929 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 RNF19BQ6ZMZ0 732 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 PAQR9Q6ZVX9 377 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 SND1Q7KZF4 910 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNX27-201ENST00000368838 BNIPLQ7Z465 357 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ACOT1Q86TX2 421 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 OSTM1Q86WC4 334 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 PSTKQ8IV42 348 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 RHOT1Q8IXI2 618 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 FUKQ8N0W3 1084 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 THEM5Q8N1Q8 247 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 EXD1Q8NHP7 514 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 COG1Q8WTW3 980 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 C2orf15Q8WU43 125 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 IRGQQ8WZA9 623 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ANKRD7Q92527 254 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 SHDQ96IW2 340 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 RUNDC3BQ96NL0 473 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 TBCBQ99426 244 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 CNGB3Q9NQW8 809 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.94
SNX27-201ENST00000368838 DDX43Q9NXZ2 648 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 RRN3Q9NYV6 651 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 ANAPC7Q9UJX3 599 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 RAB21Q9UL25 225 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 MAFFQ9ULX9 164 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 NDRG2Q9UN36 371 aaKnown RBP9.18□□□□□ -0.94
SNX27-201ENST00000368838 SLC27A5Q9Y2P5 690 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 GREB1Q4ZG55 1949 aa9.18□□□□□ -0.94
SNX27-201ENST00000368838 DNAH14Q0VDD8 3507 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 MYOFQ9NZM1 2061 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 UQCRHLA0A096LP55 91 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 OR6C75A6NL08 312 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 C2CD4BA6NLJ0 364 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 BHMG1C9JSJ3 638 aaPredicted RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 H7C4K7 107 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 PGRMC1O00264 195 aaKnown RBP9.17□□□□□ -0.94
SNX27-201ENST00000368838 TBC1D4O60343 1298 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 RNF40O75150 1001 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 SOAT2O75908 522 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 ENDOD1O94919 500 aa9.17□□□□□ -0.94
SNX27-201ENST00000368838 VNN2O95498 520 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms