RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 KCNV2Q8TDN2 545 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 GAB3Q8WWW8 586 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 BHMTQ93088 406 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 LSM14BQ9BX40 385 aaKnown RBP19.77■□□□□ 0.76
CKS1B-203ENST00000368439 VPS16Q9H269 839 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 LHX5Q9H2C1 402 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 HSD3B7Q9H2F3 369 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 NAALADL1Q9UQQ1 740 aa19.77■□□□□ 0.76
CKS1B-203ENST00000368439 AXIN1O15169 862 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 SART1O43290 800 aaKnown RBP19.76■□□□□ 0.75
CKS1B-203ENST00000368439 LATS1O95835 1130 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 UCHL3P15374 230 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 HARS2P49590 506 aaKnown RBP19.76■□□□□ 0.75
CKS1B-203ENST00000368439 DGKGP49619 791 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 LPAL2Q16609 132 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 SYPL2Q5VXT5 272 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 DQX1Q8TE96 717 aaKnown RBP19.76■□□□□ 0.75
CKS1B-203ENST00000368439 PIWIL1Q96J94 861 aaKnown RBP19.76■□□□□ 0.75
CKS1B-203ENST00000368439 CPXM1Q96SM3 734 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 GANQ9H2C0 597 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 PLCB1Q9NQ66 1216 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 CLEC4EQ9ULY5 219 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 SLC27A6Q9Y2P4 619 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 DMXL1Q9Y485 3027 aa19.76■□□□□ 0.75
CKS1B-203ENST00000368439 PES1O00541 588 aaKnown RBP19.75■□□□□ 0.75
CKS1B-203ENST00000368439 NCAM1P13591 858 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 ZNF18P17022 549 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 TGM1P22735 817 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 KLK7P49862 253 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 MYL5Q02045 173 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 RING1Q06587 406 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 RAPGEF1Q13905 1077 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 LAIR1Q6GTX8 287 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 PRR23BQ6ZRT6 265 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 PASD1Q8IV76 773 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 ZNF513Q8N8E2 541 aaPredicted RBP19.75■□□□□ 0.75
CKS1B-203ENST00000368439 TSTD1Q8NFU3 115 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 GOLGA1Q92805 767 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 FCRL2Q96LA5 508 aaPredicted RBP19.75■□□□□ 0.75
CKS1B-203ENST00000368439 NCDNQ9UBB6 729 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 LIMA1Q9UHB6 759 aaKnown RBP19.75■□□□□ 0.75
CKS1B-203ENST00000368439 SPTBN4Q9H254 2564 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 RALGAPA1Q6GYQ0 2036 aa19.75■□□□□ 0.75
CKS1B-203ENST00000368439 SDK1Q7Z5N4 2213 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 RPP40O75818 363 aaKnown RBP19.74■□□□□ 0.75
CKS1B-203ENST00000368439 DGKEP52429 567 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 TYRO3Q06418 890 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 EIF4EBP2Q13542 120 aaPredicted RBP19.74■□□□□ 0.75
CKS1B-203ENST00000368439 TAF5Q15542 800 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 EOGTQ5NDL2 527 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 ADGRF1Q5T601 910 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 EGFLAMQ63HQ2 1017 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 NUDT18Q6ZVK8 323 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 APTXQ7Z2E3 356 aaKnown RBP19.74■□□□□ 0.75
CKS1B-203ENST00000368439 C1orf131Q8NDD1 294 aaKnown RBP19.74■□□□□ 0.75
CKS1B-203ENST00000368439 MDGA1Q8NFP4 955 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 DDX1Q92499 740 aaKnown RBP19.74■□□□□ 0.75
CKS1B-203ENST00000368439 FAM149B1Q96BN6 582 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 SLC39A13Q96H72 371 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 PPP1R13BQ96KQ4 1090 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 ACOX2Q99424 681 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 STK33Q9BYT3 514 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 CD248Q9HCU0 757 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 PLXND1Q9Y4D7 1925 aa19.74■□□□□ 0.75
CKS1B-203ENST00000368439 DCHS1Q96JQ0 3298 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 LRRC10BA6NIK2 292 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 F8VZ95 297 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 EPHB6O15197 1021 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 IGLV3-25P01717 112 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 CYP11B1P15538 503 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 HOXD9P28356 352 aaPredicted RBP19.73■□□□□ 0.75
CKS1B-203ENST00000368439 COPB1P53618 953 aaKnown RBP19.73■□□□□ 0.75
CKS1B-203ENST00000368439 TBX4P57082 545 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 BPIFB4P59827 614 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 YWHAZP63104 245 aaKnown RBP19.73■□□□□ 0.75
CKS1B-203ENST00000368439 NNTQ13423 1086 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 GEN1Q17RS7 908 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 FAM133BQ5BKY9 247 aaKnown RBP19.73■□□□□ 0.75
CKS1B-203ENST00000368439 NUGGCQ68CJ6 796 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 RNF43Q68DV7 783 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 TAC4Q86UU9 113 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 KIAA2013Q8IYS2 634 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 FAM160A2Q8N612 972 aaPredicted RBP19.73■□□□□ 0.75
CKS1B-203ENST00000368439 AZIN2Q96A70 460 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 HINFPQ9BQA5 517 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 POPDC2Q9HBU9 364 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 PARD6AQ9NPB6 346 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 RAB23Q9ULC3 237 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 TLR6Q9Y2C9 796 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 SIK3Q9Y2K2 1263 aa19.73■□□□□ 0.75
CKS1B-203ENST00000368439 ABCA7Q8IZY2 2146 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 GOLGA6L7A0A1B0GV03 622 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 TSPAN3O60637 253 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 ERBB2P04626 1255 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 CYBBP04839 570 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 RETP07949 1114 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 SLC6A4P31645 630 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 CDH5P33151 784 aaPredicted RBP19.72■□□□□ 0.75
CKS1B-203ENST00000368439 KRT9P35527 623 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 SGSHP51688 502 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms