RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 RFTN1Q14699 578 aaPredicted RBP8.55□□□□□ -1.04
SSR2-202ENST00000368311 MARC1Q5VT66 337 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 CYP2U1Q7Z449 544 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 SYNPOQ8N3V7 929 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 KLHDC9Q8NEP7 349 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 WNT8BQ93098 351 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 EGFL8Q99944 293 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 AHSPQ9NZD4 102 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 BAG5Q9UL15 447 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 NUP98P52948 1817 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 TLR5O60602 858 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 TBL1XO60907 577 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 CNMDO75829 334 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 GJB5O95377 273 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 LARGE1O95461 756 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 STAU1O95793 577 aaKnown RBP8.55□□□□□ -1.04
SSR2-202ENST00000368311 TROVE2P10155 538 aaKnown RBP eCLIP8.55□□□□□ -1.04
SSR2-202ENST00000368311 CLCN6P51797 869 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 NUBP1P53384 320 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 YBEYP58557 167 aaPredicted RBP8.55□□□□□ -1.04
SSR2-202ENST00000368311 ATP11AP98196 1134 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 SNX1Q13596 522 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 AMIGO3Q86WK7 504 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 RAPGEF5Q92565 580 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 DNASE1L2Q92874 299 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 YIPF2Q9BWQ6 316 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 POLR1EQ9GZS1 481 aaKnown RBP8.55□□□□□ -1.04
SSR2-202ENST00000368311 CERS4Q9HA82 394 aa8.55□□□□□ -1.04
SSR2-202ENST00000368311 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
SSR2-202ENST00000368311 TRMT1Q9NXH9 659 aaKnown RBP8.55□□□□□ -1.04
SSR2-202ENST00000368311 PP2D1A8MPX8 630 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 PABPC1P11940 636 aaKnown RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 FGFR4P22455 802 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SCNN1AP37088 669 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 MXRA7P84157 204 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 LMAN2Q12907 356 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 NIPAL1Q6NVV3 410 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 DCP2Q8IU60 420 aaKnown RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 ZNF461Q8TAF7 563 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 LRRC40Q9H9A6 602 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 VAV3Q9UKW4 847 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CCDC88AQ3V6T2 1871 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SYNDIG1LA6NDD5 238 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 UCHL3P15374 230 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CYP2A7P20853 494 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 PIK3CGP48736 1102 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 TERF1P54274 439 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SATB1Q01826 763 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 GPR17Q13304 367 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 MAPK8IP2Q13387 824 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 TP53BP2Q13625 1128 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 PLEKHG4Q58EX7 1191 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 ERMARDQ5T6L9 678 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SHC4Q6S5L8 630 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CHST9Q7L1S5 443 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SLC2A14Q8TDB8 520 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 WHAMMQ8TF30 809 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SMARCD2Q92925 531 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CXorf40BQ96DE9 158 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 C16orf45Q96MC5 204 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 ELOVL2Q9NXB9 296 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CBX4O00257 560 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 KPNA3O00505 521 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 TTC4O95801 387 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 FTH1P02794 183 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 ALPIP09923 528 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 AMD1P17707 334 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CASP14P31944 242 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 TRIP4Q15650 581 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 CDCA2Q69YH5 1023 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 SARM1Q6SZW1 724 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 LMNTD2Q8IXW0 634 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 LPPQ93052 612 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 MCRS1Q96EZ8 462 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SLC13A1Q9BZW2 595 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 ARFGAP3Q9NP61 516 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 RCOR3Q9P2K3 495 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 ARHGAP28Q9P2N2 729 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CDH7Q9ULB5 785 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CAPN11Q9UMQ6 739 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CYTH3O43739 400 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 VEGFDO43915 354 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CER1O95813 267 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 KRT16P08779 473 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CNR2P34972 360 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 CLK2P49760 499 aaKnown RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 DGKEP52429 567 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 ZNF132P52740 706 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 EIF3EP60228 445 aaKnown RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 ARID5BQ14865 1188 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 SH2D4BQ5SQS7 431 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 KLHDC7AQ5VTJ3 777 aa8.54□□□□□ -1.04
SSR2-202ENST00000368311 PTCRAQ6ISU1 281 aaPredicted RBP8.54□□□□□ -1.04
SSR2-202ENST00000368311 MMS22LQ6ZRQ5 1243 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms