RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 NAT8LQ8N9F0 302 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 TERB1Q8NA31 727 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 PDZD8Q8NEN9 1154 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 DDX1Q92499 740 aaKnown RBP13.53□□□□□ -0.24
NCSTN-202ENST00000368063 DLG3Q92796 817 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 CEP295NLQ96MC4 621 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 SENP7Q9BQF6 1050 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 RIOX1Q9H6W3 641 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
NCSTN-202ENST00000368063 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 DNAJC16Q9Y2G8 782 aa13.53□□□□□ -0.24
NCSTN-202ENST00000368063 TBCAO75347 108 aaKnown RBP13.52□□□□□ -0.24
NCSTN-202ENST00000368063 ADRA2BP18089 450 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 NR4A1P22736 598 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 EIF3EP60228 445 aaKnown RBP13.52□□□□□ -0.24
NCSTN-202ENST00000368063 SPIRE1Q08AE8 756 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 NFATC3Q12968 1075 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 DNAJC10Q8IXB1 793 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 SIX5Q8N196 739 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 Q8N9G6 341 aaPredicted RBP13.52□□□□□ -0.24
NCSTN-202ENST00000368063 BHLHE22Q8NFJ8 381 aaPredicted RBP13.52□□□□□ -0.24
NCSTN-202ENST00000368063 FAR2Q96K12 515 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 MMP19Q99542 508 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 MKNK2Q9HBH9 465 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 PARVGQ9HBI0 331 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 PTBP2Q9UKA9 531 aaKnown RBP13.52□□□□□ -0.24
NCSTN-202ENST00000368063 PCDHGA11Q9Y5H2 935 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 SLIT2O94813 1529 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.24
NCSTN-202ENST00000368063 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 TCRBV9S1A1TA0A576 114 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 LYPLA1O75608 230 aaPredicted RBP13.52□□□□□ -0.25
NCSTN-202ENST00000368063 MYO1DO94832 1006 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 KRT75O95678 551 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 LDHCP07864 332 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 MYL4P12829 197 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 KRT10P13645 584 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 IDH3AP50213 366 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 MLLT10P55197 1068 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 PMS2P3Q13401 168 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 ARCQ7LC44 396 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 ZNF354CQ86Y25 554 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 PPIL6Q8IXY8 311 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 RTFDC1Q9BY42 306 aaPredicted RBP13.52□□□□□ -0.25
NCSTN-202ENST00000368063 IMPG2Q9BZV3 1241 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 RABL2AQ9UBK7 228 aaPredicted RBP13.52□□□□□ -0.25
NCSTN-202ENST00000368063 IKBKGQ9Y6K9 419 aa13.52□□□□□ -0.25
NCSTN-202ENST00000368063 ERVV-1B6SEH8 477 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 TIMM44O43615 452 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 GCATO75600 419 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 ZNF182P17025 639 aaPredicted RBP13.51□□□□□ -0.25
NCSTN-202ENST00000368063 MS4A2Q01362 244 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 OTUD4Q01804 1114 aaKnown RBP13.51□□□□□ -0.25
NCSTN-202ENST00000368063 PPP3CAQ08209 521 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
NCSTN-202ENST00000368063 MTM1Q13496 603 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 RAB39AQ14964 217 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 PIGGQ5H8A4 983 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 LLGL2Q6P1M3 1020 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 RFPL4BQ6ZWI9 263 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 IGDCC3Q8IVU1 814 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 MYO1HQ8N1T3 1032 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 SPERTQ8NA61 448 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 SHC3Q92529 594 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 DNAJC28Q9NX36 388 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.51□□□□□ -0.25
NCSTN-202ENST00000368063 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 SFI1A8K8P3 1242 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 PSMD11O00231 422 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 MSI1O43347 362 aaKnown RBP13.51□□□□□ -0.25
NCSTN-202ENST00000368063 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.255e-6■□□□□ 9.7
NCSTN-202ENST00000368063 ALOX5P09917 674 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 TTKP33981 857 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 IDUAP35475 653 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 ACADSBP45954 432 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 TPTEP56180 551 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 CHRNDQ07001 517 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 SPCS2Q15005 226 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 BBS9Q3SYG4 887 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 TTC39BQ5VTQ0 682 aaPredicted RBP13.51□□□□□ -0.25
NCSTN-202ENST00000368063 BTBD8Q5XKL5 378 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 PCGF5Q86SE9 256 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 UBR7Q8N806 425 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 MINDY2Q8NBR6 621 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 MED30Q96HR3 178 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 SERPINI1Q99574 410 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 TRAF6Q9Y4K3 522 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 ZNF536O15090 1300 aa13.51□□□□□ -0.25
NCSTN-202ENST00000368063 RFPL1O75677 317 aa13.5□□□□□ -0.25
NCSTN-202ENST00000368063 TMEM63AO94886 807 aa13.5□□□□□ -0.25
NCSTN-202ENST00000368063 C1QAP02745 245 aa13.5□□□□□ -0.25
NCSTN-202ENST00000368063 GAP43P17677 238 aa13.5□□□□□ -0.25
NCSTN-202ENST00000368063 POLR2BP30876 1174 aaKnown RBP13.5□□□□□ -0.25
NCSTN-202ENST00000368063 BMPR1AP36894 532 aa13.5□□□□□ -0.25
NCSTN-202ENST00000368063 GRIA3P42263 894 aa13.5□□□□□ -0.25
NCSTN-202ENST00000368063 SHROOM1Q2M3G4 852 aaPredicted RBP13.5□□□□□ -0.25
NCSTN-202ENST00000368063 PARP10Q53GL7 1025 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms