RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 STRIP2Q9ULQ0 834 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CLEC4EQ9ULY5 219 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 NUP205Q92621 2012 aa14.3□□□□□ -0.12
TNFRSF1A-202ENST00000366159 THADAQ6YHU6 1953 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CAVIN2O95810 425 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 IGLV3-27P01718 113 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HOXB2P14652 356 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BRD2P25440 801 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GBP1P32455 592 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CAMK4Q16566 473 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 GEN1Q17RS7 908 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SPDYCQ5MJ68 293 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RNF43Q68DV7 783 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TCEAL6Q6IPX3 200 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 KIAA1211LQ6NV74 962 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 FMNL3Q8IVF7 1028 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CLEC4CQ8WTT0 213 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 EDEM1Q92611 657 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BHMTQ93088 406 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TCEAL3Q969E4 200 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 IPO9Q96P70 1041 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 INTS2Q9H0H0 1204 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SFMBT1Q9UHJ3 866 aa14.29□□□□□ -0.12
TNFRSF1A-202ENST00000366159 WASH3PC4AMC7 463 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 FGFR1OPO95684 399 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 LATS1O95835 1130 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 FYNP06241 537 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 LCP1P13796 627 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 WASP42768 502 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RGS7P49802 495 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CREB5Q02930 508 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MEA1Q16626 185 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 AASDHQ4L235 1098 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 STPG1Q5TH74 334 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TMEM215Q68D42 235 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SIX6OS1Q8N1H7 587 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SLC2A11Q9BYW1 496 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 THAP10Q9P2Z0 257 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SPTBN2O15020 2390 aa14.28□□□□□ -0.12
TNFRSF1A-202ENST00000366159 M0QYV0 167 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 NPC1O15118 1278 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 FBXO21O94952 628 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 LTFP02788 710 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 C7P10643 843 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 NDUFV2P19404 249 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 HOXD9P28356 352 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PTGER3P43115 390 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BYSLQ13895 437 aaKnown RBP14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 PEAR1Q5VY43 1037 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 SMYD5Q6GMV2 418 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 TRIM65Q6PJ69 517 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 KIAA0907Q7Z7F0 614 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CHPFQ8IZ52 775 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 STK32AQ8WU08 396 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 RNF139Q8WU17 664 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 UBE2TQ9NPD8 197 aaPredicted RBP14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CACNA2D2Q9NY47 1150 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 CALCOCO1Q9P1Z2 691 aa14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 BCCIPQ9P287 314 aaKnown RBP eCLIP14.27□□□□□ -0.12
TNFRSF1A-202ENST00000366159 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 IGHV1OR15-9A0A0B4J2B8 117 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 LNP1A1A4G5 178 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 BECN2A8MW95 431 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PIK3R2O00459 728 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MSI1O43347 362 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC9A1P19634 815 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 HARS2P49590 506 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ZNF445P59923 1031 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 RING1Q06587 406 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ADGRF1Q5T601 910 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SDE2Q6IQ49 451 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 BEND5Q7L4P6 421 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 LPCAT2Q7L5N7 544 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ENOSF1Q7L5Y1 443 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 METTL3Q86U44 580 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TMEFF1Q8IYR6 380 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MLKLQ8NB16 471 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ZNF606Q8WXB4 792 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 DDX1Q92499 740 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 AZIN2Q96A70 460 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SPACA7Q96KW9 195 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 MRGPRX1Q96LB2 322 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 SLC4A5Q9BY07 1137 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 IRX2Q9BZI1 471 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 TMEM74BQ9NUR3 256 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 EVLQ9UI08 416 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CYTH4Q9UIA0 394 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 RAD54BQ9Y620 910 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 STON1Q9Y6Q2 735 aa14.26□□□□□ -0.13
TNFRSF1A-202ENST00000366159 GTPBP10A4D1E9 387 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 PATE3B3GLJ2 98 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CDX4O14627 284 aaPredicted RBP14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 CYBBP04839 570 aa14.25□□□□□ -0.13
TNFRSF1A-202ENST00000366159 ADRB1P08588 477 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms