RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MYD88Q99836 296 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 SCNM1Q9BWG6 230 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 ARL8BQ9NVJ2 186 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 MTMR4Q9NYA4 1195 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 J3KTA2 159 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 PRYO14603 147 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 MOSPD3O75425 235 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 VIPP01282 170 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 PEPDP12955 493 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 SLC5A2P31639 672 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 IDUAP35475 653 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 IGHMBP2P38935 993 aaKnown RBP5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 GSTM5P46439 218 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 CCDC144NLQ6NUI1 221 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 SHC4Q6S5L8 630 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 KYAT3Q6YP21 454 aaKnown RBP5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 C11orf96Q7Z7L8 435 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 IPO4Q8TEX9 1081 aaKnown RBP5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 MCRS1Q96EZ8 462 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 ASNSD1Q9NWL6 643 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 TUBA8Q9NY65 449 aaPredicted RBP5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 PCDHB7Q9Y5E2 793 aa5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 SIRT4Q9Y6E7 314 aaPredicted RBP5.26□□□□□ -1.57
RNU4-28P-201ENST00000364739 OR2W5A6NFC9 320 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 TAF5LO75529 589 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 TACR3P29371 465 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 AGTR2P50052 363 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 STIM1Q13586 685 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 RAB30Q15771 203 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 CNGA3Q16281 694 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 TMEM63BQ5T3F8 832 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 C16orf89Q6UX73 402 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 RASGRP3Q8IV61 690 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 CLASRPQ8N2M8 674 aaKnown RBP5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 AKAP1Q92667 903 aaKnown RBP eCLIP5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 TNIP3Q96KP6 325 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 SGCZQ96LD1 299 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 EIF3CQ99613 913 aaKnown RBP5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 ELOVL1Q9BW60 279 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 IGSF9Q9P2J2 1179 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 CDC23Q9UJX2 597 aa5.25□□□□□ -1.57
RNU4-28P-201ENST00000364739 PNMA6EA0A0J9YXQ4 647 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 PIP5K1BO14986 540 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 CTIFO43310 598 aaKnown RBP5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 ST6GAL1P15907 406 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 CFHR1Q03591 330 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 NSUN2Q08J23 767 aaKnown RBP eCLIP5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 MTA1Q13330 715 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 GRM4Q14833 912 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 RBMS2Q15434 407 aaKnown RBP5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 FAM110CQ1W6H9 321 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 PXDC1Q5TGL8 231 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 MSANTD2Q6P1R3 559 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 GGT6Q6P531 493 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 TLDC1Q6P9B6 456 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 NRACQ8N912 160 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 CELF1Q92879 486 aaKnown RBP5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 CUL5Q93034 780 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 TRMT61AQ96FX7 289 aaKnown RBP5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 FCRL5Q96RD9 977 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 PI4KBQ9UBF8 816 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 SLC39A10Q9ULF5 831 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 DTNAQ9Y4J8 743 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 AFG3L2Q9Y4W6 797 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 TTC3P53804 2025 aa5.24□□□□□ -1.57
RNU4-28P-201ENST00000364739 SPATA31A1Q5TZJ5 1347 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 SLC22A23A1A5C7 686 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 INPPL1O15357 1258 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 DHHO43323 396 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 PLA2G6O60733 806 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 PLAUP00749 431 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 PRF1P14222 555 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 DUSP1P28562 367 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 HOXA7P31268 230 aaPredicted RBP5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 STAT6P42226 847 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 CPA2P48052 419 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 TRIM71Q2Q1W2 868 aaKnown RBP5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 EARS2Q5JPH6 523 aaKnown RBP5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 EPHA10Q5JZY3 1008 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 SYCP2LQ5T4T6 812 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 C10orf25Q5T742 122 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 ACSM6Q6P461 480 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 KRT27Q7Z3Y8 459 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 KRT73Q86Y46 540 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 FAM186BQ8IYM0 893 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 SLC22A17Q8WUG5 538 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 PIGKQ92643 395 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 MUL1Q969V5 352 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 ZBTB9Q96C00 473 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 COQ8BQ96D53 544 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 FCRL4Q96PJ5 515 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 EIF2AQ9BY44 585 aaKnown RBP5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 MAFFQ9ULX9 164 aa5.23□□□□□ -1.57
RNU4-28P-201ENST00000364739 M0QYT0 321 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 PCDH17O14917 1159 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 NPC1O15118 1278 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 CER1O95813 267 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 FGBP02675 491 aa5.22□□□□□ -1.57
RNU4-28P-201ENST00000364739 CTSAP10619 480 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms