RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 SPATA31D4Q6ZUB0 917 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PIK3AP1Q6ZUJ8 805 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 KRT27Q7Z3Y8 459 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ADGRG6Q86SQ4 1221 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZNF605Q86T29 641 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NBPF11Q86T75 865 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 IQCA1Q86XH1 822 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 IGDCC3Q8IVU1 814 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZFPM1Q8IX07 1006 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 KCTD6Q8NC69 237 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MSANTD4Q8NCY6 345 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 RFWD2Q8NHY2 731 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 POMGNT1Q8WZA1 660 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ELP4Q96EB1 424 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 KIF1BPQ96EK5 621 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MCRS1Q96EZ8 462 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MASTLQ96GX5 879 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 FAR2Q96K12 515 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZBTB45Q96K62 511 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PHACTR3Q96KR7 559 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 C5orf34Q96MH7 638 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NCAPGQ9BPX3 1015 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MAK16Q9BXY0 300 aaKnown RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 FTOQ9C0B1 505 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NRDE2Q9H7Z3 1164 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GRPEL1Q9HAV7 217 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MSL2Q9HCI7 577 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 FBXO28Q9NVF7 368 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 EHD2Q9NZN4 543 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 POGKQ9P215 609 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 STEAP1Q9UHE8 339 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MBD1Q9UIS9 605 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CORO1CQ9ULV4 474 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SLC27A6Q9Y2P4 619 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 UBE2J1Q9Y385 318 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NR2E1Q9Y466 385 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PCDHB7Q9Y5E2 793 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PCDHA10Q9Y5I2 948 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SPATA31A3Q5VYP0 1347 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3DA0A087WVF3 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3IA0A087WXS9 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3EA0A087X179 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3KA0A087X1G2 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3BA6NDS4 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3FA6NER0 549 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TRIM64A6NGJ6 449 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TRIM64BA6NI03 449 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KIAA1324LA8MWY0 1029 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MYO1GB0I1T2 1018 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3LB9A6J9 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TEX22C9J3V5 150 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 UBE2CO00762 179 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 STC2O76061 302 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 WDR47O94967 919 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PRSS23O95084 383 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 CYP1A1P04798 512 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3HP0C7X1 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 COX7A2P14406 83 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ATP6V1B1P15313 513 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBXAS1P24557 533 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 HOXC13P31276 330 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 THBS4P35443 961 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DPP6P42658 865 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MSH2P43246 934 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 MTHFSP49914 203 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PDE6CP51160 858 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 DGKQP52824 942 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 EIF3BP55884 814 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TIRAPP58753 221 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 PRAMEP78395 509 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AIMP1Q12904 312 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 EIF2B5Q13144 721 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TDGQ13569 410 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AAK1Q2M2I8 961 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 LRRC24Q50LG9 513 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TCP11X2Q5H9J9 407 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 C1orf141Q5JVX7 400 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ARHGAP40Q5TG30 622 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3GQ6DHY5 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3CQ6IPX1 549 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 IL27RAQ6UWB1 636 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 FAM83HQ6ZRV2 1179 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ADGRF2Q8IZF7 708 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TBC1D3Q8IZP1 549 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NDUFAF2Q8N183 169 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SYNE4Q8N205 404 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 AVL9Q8NBF6 648 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 NSUN7Q8NE18 718 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 TMEM171Q8WVE6 324 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 RUFY2Q8WXA3 655 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ARHGEF2Q92974 986 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ARRDC3Q96B67 414 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF653Q96CK0 615 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ZNF512Q96ME7 567 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 JAKMIP1Q96N16 626 aaKnown RBP4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 VN1R3Q9BXE9 311 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 ERVMER34-1Q9H9K5 563 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 KCNK9Q9NPC2 374 aa4.02□□□□□ -1.77
RNU6-1249P-201ENST00000363237 SEMA4BQ9NPR2 832 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms