RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TSPAN3O60637 253 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 MBD4O95243 580 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 CHRM2P08172 466 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 ITPKBP27987 946 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 CTGFP29279 349 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAN1A1P33908 653 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 THBS4P35443 961 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 CASP2P42575 452 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 NR1H2P55055 460 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 FAM3BP58499 235 aaPredicted RBP4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 RPL15P61313 204 aaKnown RBP4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 E2F1Q01094 437 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 TLE3Q04726 772 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 BFSP2Q13515 415 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 LY6G5CQ5SRR4 150 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 KCNV1Q6PIU1 500 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 C16orf89Q6UX73 402 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 DPY19L3Q6ZPD9 716 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 C1orf122Q6ZSJ8 110 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 Q6ZWC4 215 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZNF551Q7Z340 670 aaPredicted RBP4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 WDR53Q7Z5U6 358 aaPredicted RBP4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 HEATR4Q86WZ0 1026 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 SIRT6Q8N6T7 355 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 NGDNQ8NEJ9 315 aaKnown RBP4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 GLMPQ8WWB7 406 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 HVCN1Q96D96 273 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 NPAS1Q99742 590 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 WDR11Q9BZH6 1224 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 SAP30LQ9HAJ7 183 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 ARHGEF3Q9NR81 526 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 SERTAD4Q9NUC0 356 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 MGAT4CQ9UBM8 478 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 AMFRQ9UKV5 643 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 BAG5Q9UL15 447 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 ASAP1Q9ULH1 1129 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.73
RNU6-28P-201ENST00000362378 VWA3AA6NCI4 1184 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 B4E171 279 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 STX16-NPEPL1H3BU86 382 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 AP4M1O00189 453 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 CES2O00748 559 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 STX16O14662 325 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 HNRNPRO43390 633 aaKnown RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 CA12O43570 354 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 HEXIM1O94992 359 aaKnown RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 CD4P01730 458 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 FAM163BP0C2L3 166 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 TMIGD3P0DMS9 266 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 NR2F6P10588 404 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 MYCLP12524 364 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ALADP13716 330 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ZNF37AP17032 561 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 IGHMBP2P38935 993 aaKnown RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 TSPAN7P41732 249 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 PDE1AP54750 535 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 EIF5P55010 431 aaKnown RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 FOXL2P58012 376 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 EFEMP1Q12805 493 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 TUBA3CQ13748 450 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 TBC1D25Q3MII6 688 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 PLAC9Q5JTB6 97 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ZNF484Q5JVG2 852 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 WDR78Q5VTH9 848 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ATG16L1Q676U5 607 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ANKRD40Q6AI12 368 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ANO7Q6IWH7 933 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 ANKRD16Q6P6B7 361 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 TUBA3EQ6PEY2 450 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 Q6ZNX1 250 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 P3H2Q8IVL5 708 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 PTGR2Q8N8N7 351 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 FSIP1Q8NA03 581 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 OR52L2PQ8NGH6 319 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 PROKR1Q8TCW9 393 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 PRR11Q96HE9 360 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 COQ10AQ96MF6 247 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 PIGSQ96S52 555 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 THAP7Q9BT49 309 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 MLST8Q9BVC4 326 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 AGXT2Q9BYV1 514 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 GPR63Q9BZJ6 419 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 DUSP22Q9NRW4 184 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 SYBUQ9NX95 663 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 DLL3Q9NYJ7 618 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 FBXO9Q9UK97 447 aaPredicted RBP4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 AFG3L2Q9Y4W6 797 aa4.21□□□□□ -1.74
RNU6-28P-201ENST00000362378 CYP3A7-CYP3A51PA0A087WV96 503 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 FOXD2O60548 495 aaPredicted RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 MBPP02686 304 aaPredicted RBP4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 ATP1A3P13637 1013 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 MATN1P21941 496 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 TGM1P22735 817 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 BDNFP23560 247 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 CYP3A7P24462 503 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 KRT9P35527 623 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 DIO1P49895 249 aa4.2□□□□□ -1.74
RNU6-28P-201ENST00000362378 CTSWP56202 376 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms