RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 PTCD3Q96EY7 689 aaKnown RBP16.75■□□□□ 0.27
IFT140-201ENST00000361339 NDE1Q9NXR1 346 aa16.75■□□□□ 0.27
IFT140-201ENST00000361339 GPD1P21695 349 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 CMPK2Q5EBM0 449 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 EFHC2Q5JST6 749 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 RASSF3Q86WH2 238 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 APLFQ8IW19 511 aaPredicted RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 C7orf31Q8N865 590 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 KHSRPQ92945 711 aaKnown RBP eCLIP16.74■□□□□ 0.27
IFT140-201ENST00000361339 CCDC124Q96CT7 223 aaKnown RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 ECSITQ9BQ95 431 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 CENPKQ9BS16 269 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 MMADHCQ9H3L0 296 aaPredicted RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 PSMC3IPQ9P2W1 217 aaPredicted RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 KBTBD13C9JR72 458 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 APOC4-APOC2K7ER74 178 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 APOC2P02655 101 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 MCF2P10911 925 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 ZNF143P52747 638 aaPredicted RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 GEMIN4P57678 1058 aaKnown RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 SPATA24Q86W54 205 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 PALM2Q8IXS6 379 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 FNIP1Q8TF40 1166 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 FAM111AQ96PZ2 611 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 SAR1AQ9NR31 198 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 KLK14Q9P0G3 267 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 BARX2Q9UMQ3 279 aaPredicted RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 MCF2LO15068 1137 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 UGT1A9O60656 530 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 PDGFRBP09619 1106 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 AKAP5P24588 427 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 RBL1P28749 1068 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 RABGGTBP53611 331 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 PQLC3Q8N755 202 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 DCAKDQ8WVC6 231 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 CFAP36Q96G28 342 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 SERAC1Q96JX3 654 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 TTC25Q96NG3 672 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 ACAP3Q96P50 834 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 TLE6Q9H808 572 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 UGT1A7Q9HAW7 530 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 UGT1A10Q9HAW8 530 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 UGT1A8Q9HAW9 530 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 ATXN10Q9UBB4 475 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 SMG5Q9UPR3 1016 aaKnown RBP16.74■□□□□ 0.27
IFT140-201ENST00000361339 SLC4A7Q9Y6M7 1214 aa16.74■□□□□ 0.27
IFT140-201ENST00000361339 H3BRB1 525 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 VDRP11473 427 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 GABRB2P47870 512 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 RASA2Q15283 850 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 KBTBD12Q3ZCT8 623 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 RBM15BQ8NDT2 890 aaKnown RBP16.73■□□□□ 0.27
IFT140-201ENST00000361339 CCDC110Q8TBZ0 833 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 MZB1Q8WU39 189 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 FAM172AQ8WUF8 416 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 TUT1Q9H6E5 874 aaKnown RBP16.73■□□□□ 0.27
IFT140-201ENST00000361339 GOLGA2P5Q9HBQ8 144 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 TMPRSS4Q9NRS4 437 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 PIH1D1Q9NWS0 290 aaKnown RBP16.73■□□□□ 0.27
IFT140-201ENST00000361339 CACNG4Q9UBN1 327 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 ACTL7BQ9Y614 415 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 KCNN4O15554 427 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 SORBS2O94875 1100 aaKnown RBP16.73■□□□□ 0.27
IFT140-201ENST00000361339 CCDC130P13994 396 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 EPHB1P54762 984 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 ALDH18A1P54886 795 aaKnown RBP16.73■□□□□ 0.27
IFT140-201ENST00000361339 ROR1Q01973 937 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 BTKQ06187 659 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 CDC16Q13042 620 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 PPIL2Q13356 520 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 TMED1Q13445 227 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 RGS9BPQ6ZS82 235 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 PLD5Q8N7P1 536 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 MECRQ9BV79 373 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 CYLDQ9NQC7 956 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 RAB6BQ9NRW1 208 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 ZNF212Q9UDV6 495 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
IFT140-201ENST00000361339 CXorf49A8MYA2 514 aaPredicted RBP16.72■□□□□ 0.27
IFT140-201ENST00000361339 ATP6V1G1O75348 118 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 SNAI1O95863 264 aaPredicted RBP16.72■□□□□ 0.27
IFT140-201ENST00000361339 GRIA1P42261 906 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 YWHAGP61981 247 aaKnown RBP eCLIP16.72■□□□□ 0.27
IFT140-201ENST00000361339 SESTD1Q86VW0 696 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 TDRPQ86YL5 185 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 PCDH19Q8TAB3 1148 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 PANX3Q96QZ0 392 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 MPHOSPH6Q99547 160 aaKnown RBP16.72■□□□□ 0.27
IFT140-201ENST00000361339 FAM192AQ9GZU8 254 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 USP29Q9HBJ7 922 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 TCRBV9S1A1TA0A576 114 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 PRPF4O43172 522 aaKnown RBP eCLIP16.72■□□□□ 0.27
IFT140-201ENST00000361339 PAPSS1O43252 624 aaPredicted RBP16.72■□□□□ 0.27
IFT140-201ENST00000361339 CIB2O75838 187 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 OSBPP22059 807 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 LMO2P25791 158 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 GRIA2P42262 883 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 FAAP100Q0VG06 881 aa16.72■□□□□ 0.27
IFT140-201ENST00000361339 KRT81Q14533 505 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms