RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 PCDHB4Q9Y5E5 795 aa7.68□□□□□ -1.18
CLCN3-202ENST00000360642 CAPN7Q9Y6W3 813 aa7.68□□□□□ -1.18
CLCN3-202ENST00000360642 LRRIQ4A6NIV6 560 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 THBDP07204 575 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 RALAP11233 206 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 NOP14P78316 857 aaKnown RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CNTN2Q02246 1040 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CAV1Q03135 178 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PLCB4Q15147 1175 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CCNG2Q16589 344 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 LIN9Q5TKA1 542 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PPP1R2P3Q6NXS1 205 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PIGWQ7Z7B1 504 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 EXOC3L1Q86VI1 746 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 SERPINB12Q96P63 405 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 KCNJ15Q99712 375 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 C11orf70Q9BRQ4 267 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 STMN4Q9H169 189 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 KRT82Q9NSB4 513 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 WDR90Q96KV7 1748 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 TCRBV5S1A1TA0A578 114 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ASAP2O43150 1006 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PEX10O60683 326 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 TCEA3O75764 348 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 FARP2O94887 1054 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ABLIM3O94929 683 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 TTC4O95801 387 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CD3EP07766 207 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 EDNRBP24530 442 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ITGA8P53708 1063 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 SF3A3Q12874 501 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 GRM1Q13255 1194 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CAPSQ13938 189 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 GALEQ14376 348 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 LACTB2Q53H82 288 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 GKAP1Q5VSY0 366 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CACNA2D3Q8IZS8 1091 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 EXD1Q8NHP7 514 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 UHMK1Q8TAS1 419 aaKnown RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CABS1Q96KC9 395 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 JPH2Q9BR39 696 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 INTS7Q9NVH2 962 aaKnown RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ASIC3Q9UHC3 531 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ACTL7BQ9Y614 415 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 SMIM23A6NLE4 172 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 MAFO75444 373 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 GAS8O95995 478 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CST3P01034 146 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 UBA1P22314 1058 aaKnown RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 MMP8P22894 467 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 KLRC2P26717 231 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 SLCO1A2P46721 670 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ALDH5A1P51649 535 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CNGA2Q16280 664 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ATP13A4Q4VNC1 1196 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 KCNV1Q6PIU1 500 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 MMS22LQ6ZRQ5 1243 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CPLX4Q7Z7G2 160 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PNMA8AQ86V59 439 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CCDC25Q86WR0 208 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PASD1Q8IV76 773 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 SUGP1Q8IWZ8 645 aaKnown RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 FEZF2Q8TBJ5 459 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ZNF606Q8WXB4 792 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 CCT6BQ92526 530 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 ZNF669Q96BR6 464 aaPredicted RBP7.67□□□□□ -1.18
CLCN3-202ENST00000360642 OSBPL8Q9BZF1 889 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 PARVAQ9NVD7 372 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 SCINQ9Y6U3 715 aa7.67□□□□□ -1.18
CLCN3-202ENST00000360642 TMEM191CA6NGB0 347 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 ASS1P00966 412 aaKnown RBP7.66□□□□□ -1.18
CLCN3-202ENST00000360642 CAPNS1P04632 268 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 TMEM191BP0C7N4 346 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 OSMP13725 252 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 CCND1P24385 295 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 HNRNPH1P31943 449 aaKnown RBP7.66□□□□□ -1.18
CLCN3-202ENST00000360642 AP3M2P53677 418 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 LONRF1Q17RB8 773 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 RNF219Q5W0B1 726 aaPredicted RBP7.66□□□□□ -1.18
CLCN3-202ENST00000360642 MBLAC2Q68D91 279 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 ZPBP2Q6X784 338 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 LBX2Q6XYB7 198 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 SEPT14Q6ZU15 432 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 ACAD11Q709F0 780 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 TAOK1Q7L7X3 1001 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 BRSK2Q8IWQ3 736 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.66□□□□□ -1.18
CLCN3-202ENST00000360642 PPIL6Q8IXY8 311 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 CCDC13Q8IYE1 715 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 GALNT6Q8NCL4 622 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 SMC1BQ8NDV3 1235 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 PRMT1Q99873 361 aaKnown RBP7.66□□□□□ -1.18
CLCN3-202ENST00000360642 SELENOSQ9BQE4 189 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 HEMGNQ9BXL5 484 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 INTS9Q9NV88 658 aaKnown RBP7.66□□□□□ -1.18
CLCN3-202ENST00000360642 OBP2AQ9NY56 170 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 ANKFY1Q9P2R3 1169 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 A0A0G2JMZ2 1700 aa7.66□□□□□ -1.18
CLCN3-202ENST00000360642 DNM1LO00429 736 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms