RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ITGA7Q13683 1181 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 ITIH4Q14624 930 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 TRIM71Q2Q1W2 868 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 TAX1BP1Q86VP1 789 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 RNF169Q8NCN4 708 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 RNF139Q8WU17 664 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 TFB1MQ8WVM0 346 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 IRGQQ8WZA9 623 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 MAGEB18Q96M61 343 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 WDR83Q9BRX9 315 aaKnown RBP18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 CSNK1G1Q9HCP0 422 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 PNPLA8Q9NP80 782 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 DTLQ9NZJ0 730 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 CHMP2BQ9UQN3 213 aa18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 TIMM13Q9Y5L4 95 aaPredicted RBP18.94■□□□□ 0.62
PDLIM7-203ENST00000359895 M0QZQ0 153 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 STK10O94804 968 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 HOXD10P28358 340 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 MAGEA9P43362 315 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 IL9RQ01113 521 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 IFT88Q13099 833 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 LRRC14Q15048 493 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 PKN2Q16513 984 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 SCML4Q8N228 414 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 ZMIZ2Q8NF64 920 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 PGAP3Q96FM1 320 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 OLFM3Q96PB7 478 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 ETNK1Q9HBU6 452 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 ARHGEF4Q9NR80 690 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 FOXO6A8MYZ6 492 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 NRP1O14786 923 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 INPPL1O15357 1258 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 B3GAT3O94766 335 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 F9P00740 461 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 POMCP01189 267 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 LTFP02788 710 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 ELNP15502 786 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 GBP2P32456 591 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 FDFT1P37268 417 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 ZNF135P52742 658 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 SCAPQ12770 1279 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 MPP2Q14168 576 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 MAPRE1Q15691 268 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 INTS6LQ5JSJ4 861 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 SYPL2Q5VXT5 272 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 FAM171BQ6P995 826 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 CCDC121Q6ZUS5 278 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 PYROXD2Q8N2H3 581 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 CCDC110Q8TBZ0 833 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 PAFAH2Q99487 392 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 TRIM62Q9BVG3 475 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 RAD54BQ9Y620 910 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 NLRC5Q86WI3 1866 aa18.93■□□□□ 0.62
PDLIM7-203ENST00000359895 HHLA1C9JL84 531 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 MAP3K6O95382 1288 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 ADRA1BP35368 520 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 SARNPP82979 210 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 NME3Q13232 169 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 PAFAH1B3Q15102 231 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 PDK1Q15118 436 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 ARL13BQ3SXY8 428 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 DCLRE1AQ6PJP8 1040 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 HFE2Q6ZVN8 426 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 PDZD4Q76G19 769 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 ECHDC2Q86YB7 292 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 THEM5Q8N1Q8 247 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 SLC7A14Q8TBB6 771 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 HTR3CQ8WXA8 447 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 MYLPFQ96A32 169 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 PAAF1Q9BRP4 392 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 MAGEB5Q9BZ81 275 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 OSBPL7Q9BZF2 842 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 RNF186Q9NXI6 227 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 IKBKGQ9Y6K9 419 aa18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-203ENST00000359895 A0A0A0MRY4 1105 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 YJEFN3A6XGL0 299 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 TCP11X1B4DZS4 312 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 KBTBD13C9JR72 458 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 E7ENQ6 273 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 EEF2KO00418 725 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 TRDMT1O14717 391 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 FYNP06241 537 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 APRTP07741 180 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 TYMPP19971 482 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 HCAR3P49019 387 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 ACLYP53396 1101 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 YWHAGP61981 247 aaKnown RBP eCLIP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 PITX1P78337 314 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 CDK16Q00536 496 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 SEMA5AQ13591 1074 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 SPARCL1Q14515 664 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 RNF187Q5TA31 235 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 MAP3K21Q5TCX8 1036 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 ALKBH8Q96BT7 664 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 SPATA13Q96N96 652 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 KCNK16Q96T55 309 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 RTP3Q9BQQ7 232 aa18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 XAB2Q9HCS7 855 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-203ENST00000359895 PIGVQ9NUD9 493 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms