RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 NAP1L1P55209 391 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 HDAC4P56524 1084 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 COG7P83436 770 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ZXDBP98169 803 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 MESDQ14696 234 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 TRIP4Q15650 581 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 RAB6CQ53S08 254 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 GET4Q7L5D6 327 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 MIB1Q86YT6 1006 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ARID3BQ8IVW6 561 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 MYADMQ96S97 322 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 NCAPGQ9BPX3 1015 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 RAB6CQ9H0N0 254 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 SLITRK6Q9H5Y7 841 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 FAM204AQ9H8W3 233 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 GKN1Q9NS71 199 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 PIGVQ9NUD9 493 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ARHGAP26Q9UNA1 814 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ZFP37Q9Y6Q3 630 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 GOLGA6L9A6NEM1 432 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 MSI1O43347 362 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 LRCH4O75427 683 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 RNF8O76064 485 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 IGLV3-27P01718 113 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 CKMP06732 381 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 TCF3P15923 654 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 DESP17661 470 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 PCK1P35558 622 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 AVPR1AP37288 418 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ATXN1P54253 815 aaKnown RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 TBX4P57082 545 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 DEUP1Q05D60 604 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 RING1Q06587 406 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 NME3Q13232 169 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 CDO1Q16878 200 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 C11orf63Q6NUN7 778 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 CC2D1AQ6P1N0 951 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 SLFN11Q7Z7L1 901 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 LRRC57Q8N9N7 239 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ZSCAN18Q8TBC5 510 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 USP13Q92995 863 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 FCRL2Q96LA5 508 aaPredicted RBP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ASB16Q96NS5 453 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 TRPV4Q9HBA0 871 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 CD320Q9NPF0 282 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 TDP1Q9NUW8 608 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 CPQQ9Y646 472 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 ALG6Q9Y672 507 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
NIF3L1-201ENST00000359683 GRID2IPA4D2P6 1211 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 STC2O76061 302 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 LAMP2P13473 410 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 SLC1A1P43005 524 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 SMAD2Q15796 467 aaKnown RBP12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 PUS10Q3MIT2 529 aaKnown RBP12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 FAM78AQ5JUQ0 283 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 PTCRAQ6ISU1 281 aaPredicted RBP12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 SMARCD2Q92925 531 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 CAPN6Q9Y6Q1 641 aa12.9□□□□□ -0.34
NIF3L1-201ENST00000359683 SYNJ2BP-COX16A0A087WUM0 186 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 TMEM110-MUSTN1A8MSY1 372 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 KCNU1A8MYU2 1149 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 PALMO75781 387 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 SLC2A3P11169 496 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 COMTP21964 271 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 MIPP30301 263 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 CCR1P32246 355 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 BRMS1LQ5PSV4 323 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 SND1Q7KZF4 910 aaKnown RBP eCLIP12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 OTOP3Q7RTS5 596 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 DAAM2Q86T65 1068 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 CPNE8Q86YQ8 564 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 WBP2Q969T9 261 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 PLD4Q96BZ4 506 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 LRFN3Q9BTN0 628 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 SMG9Q9H0W8 520 aaKnown RBP12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 WDCPQ9H6R7 721 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 ARHGEF38Q9NXL2 777 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 COX16Q9P0S2 106 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 CCL26Q9Y258 94 aa12.89□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 LEFTY2O00292 366 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 GREM1O60565 184 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 PRAMEF12O95522 483 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 KLKB1P03952 638 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 HMBSP08397 361 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 ADRA1BP35368 520 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 TMEM31Q5JXX7 168 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 DAB2IPQ5VWQ8 1189 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms