RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ACSF2Q96CM8 615 aaPredicted RBP14.01□□□□□ -0.17
CCDC197-201ENST00000359253 HERC2P3Q9BVR0 1158 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 DPH5Q9H2P9 285 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 TTYH1Q9H313 450 aaPredicted RBP14.01□□□□□ -0.17
CCDC197-201ENST00000359253 DHX35Q9H5Z1 703 aaKnown RBP14.01□□□□□ -0.17
CCDC197-201ENST00000359253 PCDH9Q9HC56 1237 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 MED4Q9NPJ6 270 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 OLA1Q9NTK5 396 aaKnown RBP14.01□□□□□ -0.17
CCDC197-201ENST00000359253 ZDHHC18Q9NUE0 388 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 CLIC5Q9NZA1 410 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 SPG21Q9NZD8 308 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 ASIC3Q9UHC3 531 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 DNPEPQ9ULA0 475 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 SNX24Q9Y343 169 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 PATJQ8NI35 1801 aa14.01□□□□□ -0.17
CCDC197-201ENST00000359253 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
CCDC197-201ENST00000359253 RRP9O43818 475 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 IGLV3-25P01717 112 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 OR4Q2P0C623 313 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 HAPLN1P10915 354 aaPredicted RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 SLC2A3P11169 496 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 TFE3P19532 575 aaPredicted RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 KLRC2P26717 231 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 RPL21P46778 160 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 EIF3EP60228 445 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 DSG1Q02413 1049 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 LLGL1Q15334 1064 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 PSMD5Q16401 504 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 ZC3H12AQ5D1E8 599 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 RTP2Q5QGT7 225 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 SPOUT1Q5T280 376 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 CFAP58Q5T655 872 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 OTUD1Q5VV17 481 aaPredicted RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 MSANTD2Q6P1R3 559 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 DENND5BQ6ZUT9 1274 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 DDX53Q86TM3 631 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 KRT222Q8N1A0 295 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 PLD5Q8N7P1 536 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 RNF139Q8WU17 664 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 RSAD2Q8WXG1 361 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 OVCA2Q8WZ82 227 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 NDRG1Q92597 394 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 CDK5RAP1Q96SZ6 601 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 RHOBTB2Q9BYZ6 727 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 OSBPL2Q9H1P3 480 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 SMOC2Q9H3U7 446 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 WDCPQ9H6R7 721 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 FAM204AQ9H8W3 233 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 WDR6Q9NNW5 1121 aaKnown RBP14□□□□□ -0.17
CCDC197-201ENST00000359253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14□□□□□ -0.17
CCDC197-201ENST00000359253 DDIT4Q9NX09 232 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 MTMR10Q9NXD2 777 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 GRHL1Q9NZI5 618 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 HPCAL4Q9UM19 191 aa14□□□□□ -0.17
CCDC197-201ENST00000359253 BCLAF3A2AJT9 711 aaKnown RBP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 LCHNA4D1U4 455 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 HACD1B0YJ81 288 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 NT5C1B-RDH14C9J2C7 533 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 SASH3O75995 380 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 LINC00271P0C7V0 271 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 YWHAQP27348 245 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 ADCY8P40145 1251 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 PLTPP55058 493 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 NME3Q13232 169 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 EIF4EBP2Q13542 120 aaPredicted RBP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 PPP2R5DQ14738 602 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 HSP90B2PQ58FF3 399 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 PPP6R3Q5H9R7 873 aaPredicted RBP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 FAM131BQ86XD5 332 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 DDX42Q86XP3 938 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 CCDC185Q8N715 623 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 GOLGA6L1Q8N7Z2 621 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 PCDH19Q8TAB3 1148 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 SERPINB11Q96P15 392 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 CSPG4P5Q96PW8 444 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 HAPLN3Q96S86 360 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 HINFPQ9BQA5 517 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 FERMT1Q9BQL6 677 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 TRIM31Q9BZY9 425 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 BRD8Q9H0E9 1235 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 TLR8Q9NR97 1041 aaKnown RBP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 PIGVQ9NUD9 493 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 AFF4Q9UHB7 1163 aaKnown RBP13.99□□□□□ -0.17
CCDC197-201ENST00000359253 PCDHB12Q9Y5F1 795 aa13.99□□□□□ -0.17
CCDC197-201ENST00000359253 H3BNC9 293 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 SGK1O00141 431 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 NCAM2O15394 837 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 OPA1O60313 960 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 PPFIA2O75334 1257 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 RBP3P10745 1247 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 IVDP26440 423 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 CCR1P32246 355 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ACTN2P35609 894 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 GLUD2P49448 558 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 KPNA1P52294 538 aaPredicted RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 DYNLT1P63172 113 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ROR1Q01973 937 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 MMRN1Q13201 1228 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 TRADDQ15628 312 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms