RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ALADP13716 330 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 ABCG1P45844 678 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 GALNTL6Q49A17 601 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 FOXR2Q6PJQ5 311 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 PTAR1Q7Z6K3 402 aaPredicted RBP14.09□□□□□ -0.15
VCP-201ENST00000358901 IL31RAQ8NI17 732 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 PPP2R3CQ969Q6 453 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 ZMAT2Q96NC0 199 aaKnown RBP14.09□□□□□ -0.15
VCP-201ENST00000358901 PURBQ96QR8 312 aaKnown RBP14.09□□□□□ -0.15
VCP-201ENST00000358901 FHDC1Q9C0D6 1143 aaPredicted RBP14.09□□□□□ -0.15
VCP-201ENST00000358901 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 SETD4Q9NVD3 440 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 UTP6Q9NYH9 597 aaKnown RBP14.09□□□□□ -0.15
VCP-201ENST00000358901 ATRNO75882 1429 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 RGL2O15211 777 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 ENTPD5O75356 428 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 ZNF286BP0CG31 522 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 PRKAA1Q13131 559 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 QPCTQ16769 361 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 BMT2Q1RMZ1 405 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 CCDC81Q6ZN84 652 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 DEFB106AQ8N104 65 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 LSM7Q9UK45 103 aaKnown RBP14.09□□□□□ -0.15
VCP-201ENST00000358901 ACTL7BQ9Y614 415 aa14.09□□□□□ -0.15
VCP-201ENST00000358901 FAM237BA0A1B0GVD1 139 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 ERI2A8K979 691 aaKnown RBP14.08□□□□□ -0.15
VCP-201ENST00000358901 DPYSL4O14531 572 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 BANF1O75531 89 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 USP1O94782 785 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 NOL4O94818 638 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 VAPBO95292 243 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 CYBBP04839 570 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 AKAP5P24588 427 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 NFYCQ13952 458 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 R3HDM1Q15032 1099 aaKnown RBP14.08□□□□□ -0.15
VCP-201ENST00000358901 GPR141Q7Z602 305 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 ATP6V0D2Q8N8Y2 350 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 REPS2Q8NFH8 660 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 HASPINQ8TF76 798 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 OTULINQ96BN8 352 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 GLIS2Q9BZE0 524 aaPredicted RBP14.08□□□□□ -0.15
VCP-201ENST00000358901 ATXN3LQ9H3M9 355 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 MROH8Q9H579 483 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 NT5MQ9NPB1 228 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 GPRC5DQ9NZD1 345 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 TCHHQ07283 1943 aa14.08□□□□□ -0.15
VCP-201ENST00000358901 RBAK-RBAKDNI3L0D1 243 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 MARSP56192 900 aaKnown RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 MRPS15P82914 257 aaKnown RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 CHRNB3Q05901 458 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 DDX39BQ13838 428 aaKnown RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 SNX31Q8N9S9 440 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 USP6NLQ92738 828 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 SEMA4DQ92854 862 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 PORCNQ9H237 461 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 TEKT2Q9UIF3 430 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 CRLS1Q9UJA2 301 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 A0A0B4J269 797 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 HNRNPCL2B2RXH8 293 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 NCAM2O15394 837 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 CDH17Q12864 832 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 ZACNQ401N2 412 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 PREPLQ4J6C6 727 aaPredicted RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 LLGL2Q6P1M3 1020 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 NPNTQ6UXI9 565 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 KCNMB4Q86W47 210 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 SNX32Q86XE0 403 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 SH3GL2Q99962 352 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 CINPQ9BW66 212 aaPredicted RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 NRDE2Q9H7Z3 1164 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 SCN3BQ9NY72 215 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 WWOXQ9NZC7 414 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 SIGLEC16A6NMB1 481 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 PRRG1O14668 218 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 FBXO21O94952 628 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 ASMTLO95671 621 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 THP07101 528 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 CETPP11597 493 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 MMP13P45452 471 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 TAS2R40P59535 323 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 ACAP1Q15027 740 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 PDK4Q16654 411 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 TDRD10Q5VZ19 366 aaKnown RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 KIAA2013Q8IYS2 634 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 HS6ST3Q8IZP7 471 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 GDPD5Q8WTR4 605 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 GTF3C2Q8WUA4 911 aaPredicted RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 CDRT15Q96T59 188 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 CYP39A1Q9NYL5 469 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 IL1RAPL1Q9NZN1 696 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 DRG1Q9Y295 367 aaKnown RBP14.08□□□□□ -0.16
VCP-201ENST00000358901 VPS9D1Q9Y2B5 631 aa14.08□□□□□ -0.16
VCP-201ENST00000358901 C2orf81A6NN90 581 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 BAIAP3O94812 1187 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 CD151P48509 253 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 CRADDP78560 199 aa14.07□□□□□ -0.16
VCP-201ENST00000358901 SLC6A3Q01959 620 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms