RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BBS7Q8IWZ6 715 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PEX5LQ8IYB4 626 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SMYD1Q8NB12 490 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 DUSP9Q99956 384 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ATP7AQ04656 1500 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 INPP4BO15327 924 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GDF11O95390 407 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PHKG2P15735 406 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 TGM2P21980 687 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SSTR3P32745 418 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 NEK10Q6ZWH5 1172 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 MBOAT7Q96N66 472 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 LMCD1Q9NZU5 365 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 MOSPD1Q9UJG1 213 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FREM3P0C091 2139 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RBM47A0AV96 593 aaKnown RBP6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PIPSLA2A3N6 862 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 SLC26A3P40879 764 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RAP1GAPP47736 663 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ITGA1P56199 1179 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 EFHC2Q5JST6 749 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 FITM2Q8N6M3 262 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CDHR1Q96JP9 859 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 NEUROG2Q9H2A3 272 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ZFYVE28Q9HCC9 887 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GNPTGQ9UJJ9 305 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 USP20Q9Y2K6 914 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ZMPSTE24O75844 475 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CCNE2O96020 404 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RPA1P27694 616 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 HK2P52789 917 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GTF2H3Q13889 308 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CLEC16AQ2KHT3 1053 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 CYP4A22Q5TCH4 519 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 MZT2BQ6NZ67 158 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PRR23BQ6ZRT6 265 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 PID1Q7Z2X4 250 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 AHI1Q8N157 1196 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 GPD1LQ8N335 351 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 NEDD1Q8NHV4 660 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 RTKNQ9BST9 563 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 ACSS3Q9H6R3 686 aa6.24□□□□□ -1.41
VPS13B-203ENST00000358544 OTOGLQ3ZCN5 2332 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 MSL3P1P0C860 447 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CLCN2P51788 898 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CERKLQ49MI3 558 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 SYTL5Q8TDW5 730 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 SEC31BQ9NQW1 1179 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 TPRKBQ9Y3C4 175 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 IRF6O14896 467 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 MAP3K13O43283 966 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CCNKO75909 580 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 NCOA4Q13772 614 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 DMRTB1Q96MA1 342 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 MTG1Q9BT17 334 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 MLPHQ9BV36 600 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 MARCH7Q9H992 704 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 USF3Q68DE3 2245 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 LOC100506127A0A0U1RQW1 187 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 HLA-DRAP01903 254 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 TKTP29401 623 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 LRPAP1P30533 357 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 EPS8Q12929 822 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CA9Q16790 459 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 NIPAL1Q6NVV3 410 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 WDR59Q6PJI9 974 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 FNDC8Q8TC99 324 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 EPB41L1Q9H4G0 881 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 TUFT1Q9NNX1 390 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 LRRC4BQ9NT99 713 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CDH9Q9ULB4 789 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 ING4Q9UNL4 249 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CLRN2A0PK11 232 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 GAS2O43903 313 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 PGAM1P18669 254 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 TRABD2AQ86V40 505 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 PPP1R10Q96QC0 940 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 STN1Q9H668 368 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 SARS2Q9NP81 518 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 DYRK4Q9NR20 520 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 DGKBQ9Y6T7 804 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 C3orf70A6NLC5 250 aaPredicted RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 UBE2Q2LH0YL09 131 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 TSPAN4O14817 238 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 ZNF263O14978 683 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 DBTP11182 482 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 FLT3P36888 993 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 DDR2Q16832 855 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 ARCQ7LC44 396 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 RDM1Q8NG50 284 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 AGAP3Q96P47 875 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 SMARCAD1Q9H4L7 1026 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 RPF1Q9H9Y2 349 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 CCNB1IP1Q9NPC3 277 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 GSC2O15499 205 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 GARTP22102 1010 aa6.23□□□□□ -1.41
VPS13B-203ENST00000358544 QARSP47897 775 aaKnown RBP6.23□□□□□ -1.41
VPS13B-203ENST00000358544 TUFMP49411 452 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms