RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 OMA1Q96E52 524 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 MTMR9Q96QG7 549 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NOL6Q9H6R4 1146 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 KIAA1257Q9ULG3 409 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 COMMD10Q9Y6G5 202 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ISPDA4D126 451 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 AKAP10O43572 662 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CYP3A4P08684 503 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 VDRP11473 427 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 EIF2AK2P19525 551 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 IL18R1Q13478 541 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NCOA4Q13772 614 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SF3B3Q15393 1217 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 MFSD14BQ5SR56 506 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 FAAH2Q6GMR7 532 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ZNF746Q6NUN9 644 aaPredicted RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CATSPER3Q86XQ3 398 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 BANPQ8N9N5 519 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 GPCPD1Q9NPB8 672 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 FBXO6Q9NRD1 293 aaPredicted RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 AGPAT3Q9NRZ7 376 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 IFRD1O00458 451 aaPredicted RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CYP27B1O15528 508 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TADA2AO75478 443 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 RBP1P09455 135 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 GNA15P30679 374 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PPP4CP60510 307 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TYSND1Q2T9J0 566 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 LRRC8EQ6NSJ5 796 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 RDH12Q96NR8 316 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 MAPRE3Q9UPY8 281 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NOTOA8MTQ0 251 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 AIM2O14862 343 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TRIM49P0CI25 452 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TRIM49CP0CI26 452 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 UMPSP11172 480 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SDC4P31431 198 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ITGA1P56199 1179 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 GABARAPL2P60520 117 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NDUFAF2Q8N183 169 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PPM1NQ8N819 430 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ETNPPLQ8TBG4 499 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SLC10A4Q96EP9 437 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NSMCE3Q96MG7 304 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ZNF577Q9BSK1 485 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 KMT5AQ9NQR1 393 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 EIF2B3Q9NR50 452 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ANKEF1Q9NU02 776 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 MBD2Q9UBB5 411 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CDH22Q9UJ99 828 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 GIT1Q9Y2X7 761 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 RWDD3Q9Y3V2 267 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TMEM221A6NGB7 291 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CCDC154A6NI56 674 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SNTNA6NMZ2 147 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PHGDHO43175 533 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CHMP2AO43633 222 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 AP1G1O43747 822 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TAB3Q8N5C8 712 aaPredicted RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TGFBRAP1Q8WUH2 860 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 FCGR1BQ92637 280 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SCYL1Q96KG9 808 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SPATA17Q96L03 361 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 OXCT2Q9BYC2 517 aaPredicted RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ADNPQ9H2P0 1102 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ADAMTS10Q9H324 1103 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 TPRKBQ9Y3C4 175 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 DGAT1O75907 488 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ZBTB11O95625 1053 aaPredicted RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PHKA2P46019 1235 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CDK8P49336 464 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 GIT2Q14161 759 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CAPRIN1Q14444 709 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NIPA1Q7RTP0 329 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 IQCF2Q8IXL9 164 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PGAM4Q8N0Y7 254 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 GMCL1P1Q8NEA9 526 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 DOLKQ9UPQ8 538 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CCNE2O96020 404 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 FASP25445 335 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 NMT1P30419 496 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PSMC5P62195 406 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 WDR72Q3MJ13 1102 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 DHFR2Q86XF0 187 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 ARHGEF19Q8IW93 802 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 FBXO36Q8NEA4 188 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 SPIRE2Q8WWL2 714 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 HNRNPABQ99729 332 aaKnown RBP6.75□□□□□ -1.33
TRIM38-201ENST00000357085 PLLPQ9Y342 182 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 IVNS1ABPQ9Y6Y0 642 aa6.75□□□□□ -1.33
TRIM38-201ENST00000357085 CRHR1P34998 444 aa6.74□□□□□ -1.33
TRIM38-201ENST00000357085 RSBN1Q5VWQ0 802 aaPredicted RBP6.74□□□□□ -1.33
TRIM38-201ENST00000357085 ERAP2Q6P179 960 aa6.74□□□□□ -1.33
TRIM38-201ENST00000357085 NSUN4Q96CB9 384 aaKnown RBP6.74□□□□□ -1.33
TRIM38-201ENST00000357085 KLF6Q99612 283 aaPredicted RBP6.74□□□□□ -1.33
TRIM38-201ENST00000357085 ST6GALNAC4Q9H4F1 302 aa6.74□□□□□ -1.33
TRIM38-201ENST00000357085 KBTBD13C9JR72 458 aa6.74□□□□□ -1.33
TRIM38-201ENST00000357085 ATMINO43313 823 aaPredicted RBP6.74□□□□□ -1.33
TRIM38-201ENST00000357085 EXTL3O43909 919 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms