RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 DDIT4Q9NX09 232 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CLIC5Q9NZA1 410 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 MARCH2Q9P0N8 246 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CD207Q9UJ71 328 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 USTQ9Y2C2 406 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 MFHAS1Q9Y4C4 1052 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CELSR3Q9NYQ7 3312 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SLC12A8A0AV02 714 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SHISA7A6NL88 538 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 KCNU1A8MYU2 1149 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 NARSO43776 548 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 HSF2BPO75031 334 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 XYLBO75191 536 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PALMO75781 387 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CALB1P05937 261 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CKMP06732 381 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 BMP1P13497 986 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TNNT1P13805 278 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 HOXC13P31276 330 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 NOS2P35228 1153 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 NOP2P46087 812 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 ITIH3Q06033 890 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 GRM2Q14416 872 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SPA17Q15506 151 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 EFHC1Q5JVL4 640 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PIK3R6Q5UE93 754 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PTCRAQ6ISU1 281 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 DCUN1D2Q6PH85 259 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ELMSAN1Q6PJG2 1045 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 VITQ6UXI7 678 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ITIH5Q86UX2 942 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 VPS36Q86VN1 386 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 BBS7Q8IWZ6 715 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ZDHHC14Q8IZN3 488 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CTNNBL1Q8WYA6 563 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 IRGQQ8WZA9 623 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ALG3Q92685 438 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 KXD1Q9BQD3 176 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 FBRSL1Q9HCM7 1045 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 PLK2Q9NYY3 685 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.19□□□□□ -1.74
LIG4-201ENST00000356922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.19□□□□□ -1.74
LIG4-201ENST00000356922 RASAL2Q9UJF2 1139 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 AGO1Q9UL18 857 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 NUP205Q92621 2012 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ATP8B3O60423 1300 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 DCHS1Q96JQ0 3298 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 LEFTY2O00292 366 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CAPN9O14815 690 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 FBXO21O94952 628 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 MOCS2O96007 188 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 IGLV3-27P01718 113 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ATP5C1P36542 298 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 DNA2P51530 1060 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SLC25A11Q02978 314 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 MMRN1Q13201 1228 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SMAD2Q15796 467 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 FAM133BQ5BKY9 247 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 DCAF12L1Q5VU92 463 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CC2D1AQ6P1N0 951 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 RSRC2Q7L4I2 434 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 CIR1Q86X95 450 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 DENND1CQ8IV53 801 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ADGRG2Q8IZP9 1017 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CFAP52Q8N1V2 620 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CCDC33Q8N5R6 958 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SH3RF2Q8TEC5 729 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 IPO4Q8TEX9 1081 aaKnown RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 RFFLQ8WZ73 363 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 RAPGEF5Q92565 580 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CD101Q93033 1021 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TRIM44Q96DX7 344 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 NOX5Q96PH1 765 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PSMB7Q99436 277 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TASP1Q9H6P5 420 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TDP1Q9NUW8 608 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 ETNK2Q9NVF9 386 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 DZANK1Q9NVP4 752 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 GTSE1Q9NYZ3 720 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 NEU3Q9UQ49 428 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 WNT6Q9Y6F9 365 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 DENND4AQ7Z401 1863 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PI4K2BG5E9Z4 385 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 IRAK2O43187 625 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 DAB1O75553 588 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CNTN5O94779 1100 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 MBL2P11226 248 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 GPD1P21695 349 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PSMA2P25787 234 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 GBP2P32456 591 aaPredicted RBP4.19□□□□□ -1.74
LIG4-201ENST00000356922 CXCR3P49682 368 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SULT1E1P49888 294 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 PEX5P50542 639 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 TCEAL1Q15170 157 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 LEXMQ3ZCV2 418 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 CES5AQ6NT32 575 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SCYL2Q6P3W7 929 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 B4GALNT4Q76KP1 1039 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 SLFN11Q7Z7L1 901 aa4.19□□□□□ -1.74
LIG4-201ENST00000356922 KIAA1328Q86T90 577 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms