RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CLIC2O15247 247 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 MSI1O43347 362 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 CAPN15O75808 1086 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 STAM2O75886 525 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 FKBP9O95302 570 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 GCNT3O95395 438 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 CPNE6O95741 557 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 NCAM1P13591 858 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 SSTR1P30872 391 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 MFAP3P55082 362 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PEX3P56589 373 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 C19orf57Q0VDD7 668 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PDE1CQ14123 709 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 WDR45BQ5MNZ6 344 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 TEDDM1Q5T9Z0 273 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PDPK2PQ6A1A2 396 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 BNC2Q6ZN30 1099 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 FRMD7Q6ZUT3 714 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 MCOLN2Q8IZK6 566 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PDIK1LQ8N165 341 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ESX1Q8N693 406 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 FBXO36Q8NEA4 188 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PDZD8Q8NEN9 1154 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PDCD6IPQ8WUM4 868 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 TFAP2CQ92754 450 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 NSUN4Q96CB9 384 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 WNK4Q96J92 1243 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 VCPIP1Q96JH7 1222 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 EGLN2Q96KS0 407 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 EBF4Q9BQW3 602 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 WDR83Q9BRX9 315 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 TMEM79Q9BSE2 394 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 DCUN1D5Q9BTE7 237 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 KLHL25Q9H0H3 589 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 COPS7BQ9H9Q2 264 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 HMG20AQ9NP66 347 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 DNPEPQ9ULA0 475 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ATP11BQ9Y2G3 1177 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ANGPTL3Q9Y5C1 460 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 ERVV-1B6SEH8 477 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 CLDN25C9JDP6 229 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 JRKO75564 520 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 SORBS2O94875 1100 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 ALX3O95076 343 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 UGT2B4P06133 528 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 UNGP13051 313 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 CYP11B1P15538 503 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 CCNA2P20248 432 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 TCEA1P23193 301 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 RFC4P35249 363 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 IDH3AP50213 366 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 MRPS5P82675 430 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 CACNB1Q02641 598 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 SPIRE1Q08AE8 756 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 NFX1Q12986 1120 aaKnown RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 PPIL2Q13356 520 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PARP10Q53GL7 1025 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 FAM47CQ5HY64 1035 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 NHSL2Q5HYW2 709 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 SLC27A3Q5K4L6 730 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 XKR5Q6UX68 686 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ARHGEF19Q8IW93 802 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 PGAM4Q8N0Y7 254 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ANKFN1Q8N957 763 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 SLC35B2Q8TB61 432 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ACMSDQ8TDX5 336 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ZNF384Q8TF68 577 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 HPS1Q92902 700 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ATP2A3Q93084 1043 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 VMP1Q96GC9 406 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 NACC1Q96RE7 527 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 BCL7BQ9BQE9 202 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 SMARCAD1Q9H4L7 1026 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 C12orf10Q9HB07 376 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 CPNE5Q9HCH3 593 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 AGPAT3Q9NRZ7 376 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 KCND2Q9NZV8 630 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 CDC14AQ9UNH5 594 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 ATF5Q9Y2D1 282 aaPredicted RBP7.92□□□□□ -1.14
CCR9-201ENST00000355983 PCDHGA11Q9Y5H2 935 aa7.92□□□□□ -1.14
CCR9-201ENST00000355983 A0A1B0GTW7 788 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 LRRIQ4A6NIV6 560 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 ZNF195O14628 629 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 ACOT8O14734 319 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 MARCH6O60337 910 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 C1QAP02745 245 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 ME2P23368 584 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 POLR2BP30876 1174 aaKnown RBP7.91□□□□□ -1.14
CCR9-201ENST00000355983 GABRB2P47870 512 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 HK2P52789 917 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 SNRPFP62306 86 aaKnown RBP7.91□□□□□ -1.14
CCR9-201ENST00000355983 CTAG1AP78358 180 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 MRPS22P82650 360 aaKnown RBP7.91□□□□□ -1.14
CCR9-201ENST00000355983 ENPEPQ07075 957 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 ITGADQ13349 1161 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 CCNJQ5T5M9 372 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 PLEKHA7Q6IQ23 1121 aa7.91□□□□□ -1.14
CCR9-201ENST00000355983 ZNF746Q6NUN9 644 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms