RNA–Protein interactions for RNA: ENST00000355849.9

KHDRBS3-201, Transcript of KH RNA binding domain containing, signal transduction associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDRBS3, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDRBS3-201ENST00000355849 MAGEA4P43358 317 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 QPCTQ16769 361 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 CPT1BQ92523 772 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 EDEM1Q92611 657 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 SAYSD1Q9NPB0 183 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 TMPRSS4Q9NRS4 437 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 USP3Q9Y6I4 520 aa28.39■■■□□ 2.14
KHDRBS3-201ENST00000355849 BRCA2P51587 3418 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 BCLAF3A2AJT9 711 aaKnown RBP28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 H3BRJ5 948 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 SYN3O14994 580 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 KCNN4O15554 427 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 HOXA2O43364 376 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 MAP3K6O95382 1288 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 DRD4P21917 467 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 AMPD1P23109 780 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 NR2C2P49116 596 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 ATXN2LQ8WWM7 1075 aaKnown RBP28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 PGAP3Q96FM1 320 aaPredicted RBP28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 CCDC134Q9H6E4 229 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 USP29Q9HBJ7 922 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 DDIT4Q9NX09 232 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 ADAM28Q9UKQ2 775 aa28.39■■■□□ 2.13
KHDRBS3-201ENST00000355849 AIF1P55008 147 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 CCL23P55773 120 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 GBE1Q04446 702 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 BSPRYQ5W0U4 402 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 SLC39A5Q6ZMH5 540 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 CDKL3Q8IVW4 592 aaPredicted RBP28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 TAB3Q8N5C8 712 aaPredicted RBP28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 MDM1Q8TC05 714 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 NTAN1Q96AB6 310 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 COLEC11Q9BWP8 271 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 PRDM16Q9HAZ2 1276 aa28.38■■■□□ 2.13
KHDRBS3-201ENST00000355849 SMIM23A6NLE4 172 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 F9P00740 461 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 CHN1P15882 459 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 RBL1P28749 1068 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 ADRA1BP35368 520 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 NRLP54845 237 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 AUHQ13825 339 aaKnown RBP28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 VARS2Q5ST30 1063 aaKnown RBP28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 ANKRD33Q7Z3H0 272 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 RNF139Q8WU17 664 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 CHMP6Q96FZ7 201 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 SEC16BQ96JE7 1060 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 C9orf72Q96LT7 481 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 TRIM62Q9BVG3 475 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 WDR6Q9NNW5 1121 aaKnown RBP28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 RASGRF2O14827 1237 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 ALDH2P05091 517 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 IFT88Q13099 833 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 XRCC4Q13426 336 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 NCBP2-AS2Q69YL0 99 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 CENPUQ71F23 418 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 NPAS4Q8IUM7 802 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 NAT8LQ8N9F0 302 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 SCAMP5Q8TAC9 235 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 RTP4Q96DX8 246 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 ZNF317Q96PQ6 595 aaPredicted RBP28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 PPP1R12CQ9BZL4 782 aa28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 ABI2Q9NYB9 513 aaPredicted RBP28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.37■■■□□ 2.13
KHDRBS3-201ENST00000355849 SMAPO00193 183 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 SLC5A3P53794 718 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 IFI35P80217 286 aaPredicted RBP28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 BASP1P80723 227 aaKnown RBP28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 SLC10A2Q12908 348 aaPredicted RBP28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 NFE2Q16621 373 aaPredicted RBP28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 ANKRD22Q5VYY1 191 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 CEP57Q86XR8 500 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 CNPY4Q8N129 248 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 EPS8L3Q8TE67 593 aaKnown RBP28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 ARHGEF4Q9NR80 690 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 ETNK2Q9NVF9 386 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 PAK5Q9P286 719 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 FBXW11Q9UKB1 542 aa28.36■■■□□ 2.13
KHDRBS3-201ENST00000355849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 GOLGA8MH3BSY2 632 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 CREB3O43889 395 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 FAM171A1Q5VUB5 890 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 SCN4BQ8IWT1 228 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 MRPL9Q9BYD2 267 aaKnown RBP28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 CEP350Q5VT06 3117 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 CXCL10P02778 98 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 SLC11A1P49279 550 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 SCAPQ12770 1279 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 IFRD2Q12894 506 aaPredicted RBP28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 ARL13BQ3SXY8 428 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 CTXN3Q4LDR2 81 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 GKAP1Q5VSY0 366 aaPredicted RBP28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 CACNA2D3Q8IZS8 1091 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 DTLQ9NZJ0 730 aa28.35■■■□□ 2.13
KHDRBS3-201ENST00000355849 EEF2KO00418 725 aaKnown RBP28.34■■■□□ 2.13
KHDRBS3-201ENST00000355849 PARNO95453 639 aaKnown RBP28.34■■■□□ 2.13
KHDRBS3-201ENST00000355849 SLCO1A2P46721 670 aa28.34■■■□□ 2.13
KHDRBS3-201ENST00000355849 ARL4CP56559 192 aa28.34■■■□□ 2.13
KHDRBS3-201ENST00000355849 FAAP100Q0VG06 881 aa28.34■■■□□ 2.13
KHDRBS3-201ENST00000355849 HIF1AQ16665 826 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms