RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SH3PXD2AQ5TCZ1 1133 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 MAP1SQ66K74 1059 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 ARMCX2Q7L311 632 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 ZNF572Q7Z3I7 529 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 MTFR1LQ9H019 292 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 SEMA6AQ9H2E6 1030 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 MMADHCQ9H3L0 296 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 BFARQ9NZS9 450 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 CNTNAP1P78357 1384 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 FAM237BA0A1B0GVD1 139 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 E7ENQ6 273 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 GOLGA8TH3BQL2 631 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 ACKR2O00590 384 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 XPOTO43592 962 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 HMGCRP04035 888 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 NUDT17P0C025 328 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 PMLP29590 882 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 RPL22P35268 128 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 GNL1P36915 607 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 DRG2P55039 364 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 MRPS22P82650 360 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 KBTBD12Q3ZCT8 623 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 C6orf10Q5SRN2 563 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 TSHZ1Q6ZSZ6 1077 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 FAM210AQ96ND0 272 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 CDT1Q9H211 546 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 FAM96AQ9H5X1 160 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 TASP1Q9H6P5 420 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 NDUFA13Q9P0J0 144 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 SLC12A6Q9UHW9 1150 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 SAC3D1A6NKF1 404 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 LYPLA2O95372 231 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 DLGAP3O95886 979 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 C6orf222P0C671 652 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 PKNOX1P55347 436 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 TBL3Q12788 808 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 DCTN2Q13561 401 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 BLMHQ13867 455 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 CWF19L1Q69YN2 538 aaKnown RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 TMPRSS6Q8IU80 811 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 OR6P1Q8NGX9 317 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 ZNF483Q8TF39 744 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-202ENST00000355815 UCMAQ8WVF2 138 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 VPS39Q96JC1 886 aa14.48□□□□□ -0.09
SREBF1-202ENST00000355815 AMPD1P23109 780 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 MMP13P45452 471 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 GLRBP48167 497 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 GAD2Q05329 585 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 POTEAQ6S8J7 498 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 TMC5Q6UXY8 1006 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 ZDHHC14Q8IZN3 488 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 SLC7A14Q8TBB6 771 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 NDRG1Q92597 394 aaKnown RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 PBXIP1Q96AQ6 731 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 TMEM79Q9BSE2 394 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 CCL15-CCL14A0A0B4J2E2 113 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 VNN1O95497 513 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 ASS1P00966 412 aaKnown RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 CCNFP41002 786 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 CCL15Q16663 113 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 CCDC103Q8IW40 242 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 KATNAL2Q8IYT4 538 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 DNAJC1Q96KC8 554 aaKnown RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 LPIN3Q9BQK8 851 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 COPS7BQ9H9Q2 264 aaPredicted RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 TAGLN3Q9UI15 199 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 STRNO43815 780 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 MMP8P22894 467 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 SP100P23497 879 aaPredicted RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 KDELR1P24390 212 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 GSCP56915 257 aaPredicted RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 TEDDM1Q5T9Z0 273 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 C12orf56Q8IXR9 622 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 CLPTM1LQ96KA5 538 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 TRAPPC9Q96Q05 1148 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 ACO2Q99798 780 aaKnown RBP14.47□□□□□ -0.09
SREBF1-202ENST00000355815 PIF1Q9H611 641 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 SLC5A4Q9NY91 659 aa14.47□□□□□ -0.09
SREBF1-202ENST00000355815 DCXO43602 365 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 FARP2O94887 1054 aaPredicted RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 ACO1P21399 889 aaKnown RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 C16orf46Q6P387 395 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 OLFML1Q6UWY5 402 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 CYP2R1Q6VVX0 501 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 RBM44Q6ZP01 1051 aaKnown RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 ERO1BQ86YB8 467 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 APLFQ8IW19 511 aaPredicted RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 CDCA5Q96FF9 252 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 OXNAD1Q96HP4 312 aaPredicted RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 HERPUD2Q9BSE4 406 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.46□□□□□ -0.096e-12■■■■■ 51.1
SREBF1-202ENST00000355815 ZC3H4Q9UPT8 1303 aaKnown RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 M0QYT0 321 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 DFFAO00273 331 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 OCM2P0CE71 109 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 OCMP0CE72 109 aaPredicted RBP14.46□□□□□ -0.09
SREBF1-202ENST00000355815 CCDC130P13994 396 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 KCNA4P22459 653 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 USP46P62068 366 aa14.46□□□□□ -0.09
SREBF1-202ENST00000355815 ANKRD22Q5VYY1 191 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms