RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 BMPR2Q13873 1038 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 REXO1L1PQ8IX06 675 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 ACTRT1Q8TDG2 376 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 TMEM159Q96B96 161 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 INTS13Q9NVM9 706 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 TPH1P17752 444 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 PSEN2P49810 448 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 AQP5P55064 265 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 DMAP1Q9NPF5 467 aaPredicted RBP18.5■□□□□ 0.55
COL18A1-202ENST00000355480 PTPRMP28827 1452 aa18.5■□□□□ 0.55
COL18A1-202ENST00000355480 BNC2Q6ZN30 1099 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-202ENST00000355480 VN1R5Q7Z5H4 357 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 TDRD5Q8NAT2 981 aaKnown RBP18.49■□□□□ 0.55
COL18A1-202ENST00000355480 CYP2W1Q8TAV3 490 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 SERPINB11Q96P15 392 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 FBXO10Q9UK96 956 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 WNT10BO00744 389 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 CYP7B1O75881 506 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 MICAL2O94851 1124 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 CYP2A7P20853 494 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 YWHAZP63104 245 aaKnown RBP18.49■□□□□ 0.55
COL18A1-202ENST00000355480 NR6A1Q15406 480 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 GANQ9H2C0 597 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-202ENST00000355480 XYLBO75191 536 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 AXLP30530 894 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 FSCN1Q16658 493 aaKnown RBP18.49■□□□□ 0.55
COL18A1-202ENST00000355480 PPM1LQ5SGD2 360 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 SLC22A9Q8IVM8 553 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 SYTL1Q8IYJ3 562 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 E9PBE3 544 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 KLHL41O60662 606 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 OAZ1P54368 228 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 C3orf67Q6ZVT6 689 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 MCOLN2Q8IZK6 566 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 ZNF606Q8WXB4 792 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 SNX13Q9Y5W8 968 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 SNX8Q9Y5X2 465 aa18.49■□□□□ 0.55
COL18A1-202ENST00000355480 INO80Q9ULG1 1556 aaPredicted RBP18.49■□□□□ 0.55
COL18A1-202ENST00000355480 MAGEB16A2A368 324 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 SLCO1B7G3V0H7 640 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 CDH17Q12864 832 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 MTA1Q13330 715 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ACVR2BQ13705 512 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 USP39Q53GS9 565 aaKnown RBP18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ARHGAP17Q68EM7 881 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 CDCA5Q96FF9 252 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 IGFLR1Q9H665 355 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ASB7Q9H672 318 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 HMX1Q9NP08 348 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-202ENST00000355480 LACTBL1A8MY62 500 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 SLC39A12Q504Y0 691 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ZDHHC17Q8IUH5 632 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 LGI2Q8N0V4 545 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 SPIRE2Q8WWL2 714 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ELMO3Q96BJ8 720 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 HPSEQ9Y251 543 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 TDRKHQ9Y2W6 561 aaKnown RBP18.48■□□□□ 0.55
COL18A1-202ENST00000355480 SLC2A4P14672 509 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ATP6V1B1P15313 513 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ATP6V1B2P21281 511 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 CD151P48509 253 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 PEX5P50542 639 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 TRPV2Q9Y5S1 764 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 BAIAP3O94812 1187 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 RTN3O95197 1032 aaPredicted RBP18.48■□□□□ 0.55
COL18A1-202ENST00000355480 BOP1Q14137 746 aaKnown RBP18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ACOX1Q15067 660 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ZNF410Q86VK4 478 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ADAM32Q8TC27 787 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 SH3GL1Q99961 368 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 RERGLQ9H628 205 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 PALMDQ9NP74 551 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 VHLP40337 213 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 CACUL1Q86Y37 369 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 FBXO25Q8TCJ0 367 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 ELOVL4Q9GZR5 314 aa18.48■□□□□ 0.55
COL18A1-202ENST00000355480 KDM7AQ6ZMT4 941 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 FGD2Q7Z6J4 655 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ZSWIM2Q8NEG5 633 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 SLC2A14Q8TDB8 520 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ZCCHC2Q9C0B9 1178 aaKnown RBP18.47■□□□□ 0.55
COL18A1-202ENST00000355480 PARVBQ9HBI1 364 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 HAO1Q9UJM8 370 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 FAM86B1E9PN63 330 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ACKR2O00590 384 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 KRT6AP02538 564 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 KRT6BP04259 564 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 FAM86B2P0C5J1 330 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 GRK2P25098 689 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 KRT6CP48668 564 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 ZNF268Q14587 947 aaPredicted RBP18.47■□□□□ 0.55
COL18A1-202ENST00000355480 PKN1Q16512 942 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 DNAAF5Q86Y56 855 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 FAM120BQ96EK7 910 aaKnown RBP18.47■□□□□ 0.55
COL18A1-202ENST00000355480 AHSPQ9NZD4 102 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
COL18A1-202ENST00000355480 KANSL1LA0AUZ9 987 aa18.47■□□□□ 0.55
COL18A1-202ENST00000355480 KATNA1O75449 491 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms