RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 DTLQ9NZJ0 730 aa17.29■□□□□ 0.36
SAMM50-201ENST00000350028 SF3B1O75533 1304 aaKnown RBP eCLIP17.28■□□□□ 0.365e-6■■■■■ 174.7
SAMM50-201ENST00000350028 ARHGEF37A1IGU5 675 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TCP11X1B4DZS4 312 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 NRP1O14786 923 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
SAMM50-201ENST00000350028 MAP3K6O95382 1288 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 GSTA2P09210 222 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TPSB2P20231 275 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 PITX1P78337 314 aaPredicted RBP17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TUSC3Q13454 348 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 ITGA7Q13683 1181 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TPSAB1Q15661 275 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TRIM71Q2Q1W2 868 aaKnown RBP17.28■□□□□ 0.36
SAMM50-201ENST00000350028 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
SAMM50-201ENST00000350028 SYPL2Q5VXT5 272 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 HEATR6Q6AI08 1181 aaKnown RBP17.28■□□□□ 0.36
SAMM50-201ENST00000350028 CCDC121Q6ZUS5 278 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 HFE2Q6ZVN8 426 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 RNF169Q8NCN4 708 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 RNF139Q8WU17 664 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TFB1MQ8WVM0 346 aaKnown RBP17.28■□□□□ 0.36
SAMM50-201ENST00000350028 NTAN1Q96AB6 310 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 OLFM3Q96PB7 478 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 PAFAH2Q99487 392 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 ADAM2Q99965 735 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 CSNK1G1Q9HCP0 422 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 ARHGEF4Q9NR80 690 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 RNF186Q9NXI6 227 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 NOD1Q9Y239 953 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 TSC2P49815 1807 aa17.28■□□□□ 0.36
SAMM50-201ENST00000350028 HHLA1C9JL84 531 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 TRIM66O15016 1216 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 FYNP06241 537 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 C1QTNF8P60827 252 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 SP3Q02447 781 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 FAM171BQ6P995 826 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 IGDCC3Q8IVU1 814 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 DENND1AQ8TEH3 1009 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 IRGQQ8WZA9 623 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 PGAP3Q96FM1 320 aaPredicted RBP17.27■□□□□ 0.36
SAMM50-201ENST00000350028 ELAC2Q9BQ52 826 aaKnown RBP17.27■□□□□ 0.36
SAMM50-201ENST00000350028 FERMT1Q9BQL6 677 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 PAAF1Q9BRP4 392 aa17.27■□□□□ 0.36
SAMM50-201ENST00000350028 TDRD15B5MCY1 1934 aaKnown RBP17.27■□□□□ 0.35
SAMM50-201ENST00000350028 YJEFN3A6XGL0 299 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 KBTBD13C9JR72 458 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 E7ENQ6 273 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 M0QZQ0 153 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 TRPA1O75762 1119 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 B3GAT3O94766 335 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 F9P00740 461 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 POMCP01189 267 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 LTFP02788 710 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 ADRA1BP35368 520 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 FDFT1P37268 417 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 YWHAGP61981 247 aaKnown RBP eCLIP17.27■□□□□ 0.35
SAMM50-201ENST00000350028 NME3Q13232 169 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 PAFAH1B3Q15102 231 aaKnown RBP17.27■□□□□ 0.35
SAMM50-201ENST00000350028 INTS6LQ5JSJ4 861 aaKnown RBP17.27■□□□□ 0.35
SAMM50-201ENST00000350028 RNF180Q86T96 592 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.35
SAMM50-201ENST00000350028 SCML4Q8N228 414 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 GDAP1Q8TB36 358 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 SLC7A14Q8TBB6 771 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 DCAKDQ8WVC6 231 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 HTR3CQ8WXA8 447 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 PPM1EQ8WY54 764 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 MRRFQ96E11 262 aaKnown RBP17.27■□□□□ 0.35
SAMM50-201ENST00000350028 KCNK16Q96T55 309 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 RTP3Q9BQQ7 232 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 MLXIPLQ9NP71 852 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 PIGVQ9NUD9 493 aa17.27■□□□□ 0.35
SAMM50-201ENST00000350028 SYNJ2BP-COX16A0A087WUM0 186 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 TRDMT1O14717 391 aaKnown RBP17.26■□□□□ 0.35
SAMM50-201ENST00000350028 SPAG7O75391 227 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 STK10O94804 968 aaKnown RBP17.26■□□□□ 0.35
SAMM50-201ENST00000350028 METTL18O95568 372 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 APRTP07741 180 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 ELNP15502 786 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
SAMM50-201ENST00000350028 SCAPQ12770 1279 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 SEMA5AQ13591 1074 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 SPARCL1Q14515 664 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 EFTUD2Q15029 972 aaKnown RBP eCLIP17.26■□□□□ 0.35
SAMM50-201ENST00000350028 PDK1Q15118 436 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 FAXCQ5TGI0 409 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 DCLRE1AQ6PJP8 1040 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 CD300LGQ6UXG3 332 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 CAND1Q86VP6 1230 aaKnown RBP17.26■□□□□ 0.35
SAMM50-201ENST00000350028 ECHDC2Q86YB7 292 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 MYLPFQ96A32 169 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 ALKBH8Q96BT7 664 aaKnown RBP17.26■□□□□ 0.35
SAMM50-201ENST00000350028 CFHR5Q9BXR6 569 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 RASSF4Q9H2L5 321 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 COX16Q9P0S2 106 aa17.26■□□□□ 0.35
SAMM50-201ENST00000350028 A0A0A0MRY4 1105 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 IQANK1A0A1B0GTG1 560 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 A0A1W2PPM1 405 aa17.25■□□□□ 0.35
SAMM50-201ENST00000350028 EEF2KO00418 725 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms