RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 OLIG2Q13516 323 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 GLRA4Q5JXX5 417 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 LGSNQ5TDP6 509 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 CCDC185Q8N715 623 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 PHC3Q8NDX5 983 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 GSDMBQ8TAX9 411 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 SLC35F5Q8WV83 523 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 ZNF778Q96MU6 729 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 ANKRD27Q96NW4 1050 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 SHCBP1LQ9BZQ2 653 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 MTMR10Q9NXD2 777 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 RBPJLQ9UBG7 517 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 PSAT1Q9Y617 370 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 TNS1Q9HBL0 1735 aaKnown RBP18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 LIN7AO14910 233 aaPredicted RBP18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 ZNF286BP0CG31 522 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 MAGEA3P43357 314 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 SESN2P58004 480 aaPredicted RBP18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 SOWAHAQ2M3V2 549 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 PKDCCQ504Y2 493 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 ATG16L1Q676U5 607 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 HESX1Q9UBX0 185 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 HBS1LQ9Y450 684 aaKnown RBP18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 PPME1Q9Y570 386 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 ANK1P16157 1881 aa18.7■□□□□ 0.58
PTP4A3-202ENST00000349124 MYO18AQ92614 2054 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 LCP1P13796 627 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 KLC1Q07866 573 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 STX3Q13277 289 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 PPM1JQ5JR12 505 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 CRLF3Q8IUI8 442 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 POU5F2Q8N7G0 328 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 NLRP7Q8WX94 980 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 C18orf25Q96B23 403 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 PANX3Q96QZ0 392 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 STX18Q9P2W9 335 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 EME2A4GXA9 379 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 SNNO75324 88 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 SORBS2O94875 1100 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 C6orf222P0C671 652 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 VAV1P15498 845 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 TMEM62Q0P6H9 643 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 FASTKD1Q53R41 847 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 TMPRSS6Q8IU80 811 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 TP53INP2Q8IXH6 220 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 KCTD15Q96SI1 283 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 CCDC106Q9BWC9 280 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 SLC4A5Q9BY07 1137 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 PIDD1Q9HB75 910 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 GPRC5DQ9NZD1 345 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 EMCNQ9ULC0 261 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 PLA2G4CQ9UP65 541 aa18.69■□□□□ 0.58
PTP4A3-202ENST00000349124 USP1O94782 785 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 IL1BP01584 269 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 GOT1P17174 413 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 ADORA2BP29275 332 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 CRHR1P34998 444 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 MAGEA6P43360 314 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 RIPOR1Q6ZS17 1223 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 TMEM110Q86TL2 294 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 SCUBE1Q8IWY4 988 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 MCUQ8NE86 351 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 TTC1Q99614 292 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 DTLQ9NZJ0 730 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 SLC7A8Q9UHI5 535 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 ADM5C9JUS6 153 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 ALDOAP04075 364 aaKnown RBP18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 CCDC130P13994 396 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 GTF2A2P52657 109 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 SLC25A3Q00325 362 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 GRIK3Q13003 919 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 RNF220Q5VTB9 566 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 EXOC8Q8IYI6 725 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 OR6B3Q8NGW1 331 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 CSPG4P5Q96PW8 444 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 DDX50Q9BQ39 737 aaKnown RBP18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 ZNF358Q9NW07 568 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 ERAP1Q9NZ08 941 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 MOCS1Q9NZB8 636 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 TUBGCP4Q9UGJ1 667 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 PCDHA11Q9Y5I1 949 aa18.68■□□□□ 0.58
PTP4A3-202ENST00000349124 ARRB2P32121 409 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 MXRA7P84157 204 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 RSPH3Q86UC2 560 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 ULK2Q8IYT8 1036 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 PPP1R14CQ8TAE6 165 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 TEKT4Q8WW24 435 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 USP6NLQ92738 828 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 ZNF670Q9BS34 389 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 PPP1R12CQ9BZL4 782 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 AP4E1Q9UPM8 1137 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 DNAJC16Q9Y2G8 782 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 SYNJ2BP-COX16A0A087WUM0 186 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 DPYSL4O14531 572 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 TSPAN1O60635 241 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 GCATO75600 419 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 BAG2O95816 211 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 LMO2P25791 158 aa18.67■□□□□ 0.58
PTP4A3-202ENST00000349124 PITX1P78337 314 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms