RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CNTNAP2Q9UHC6 1331 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 CST8O60676 142 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SIN3BO75182 1162 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 RFPL1O75677 317 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SNRPAP09012 282 aaKnown RBP19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SUPT20HL2P0C7V6 817 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SMTNL2Q2TAL5 461 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SUPT20HL1Q3ZLR7 823 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SLC44A4Q53GD3 710 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 XRRA1Q6P2D8 792 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 VCPIP1Q96JH7 1222 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 YIPF2Q9BWQ6 316 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 PORCNQ9H237 461 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 Q9H521 79 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 LIN28AQ9H9Z2 209 aaKnown RBP19.26■□□□□ 0.67
SCARF1-202ENST00000348987 PCDH18Q9HCL0 1135 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 MYH9P35579 1960 aaKnown RBP19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SPATA31C2B4DYI2 1134 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 UGT1A9O60656 530 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 TOM1L1O75674 476 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 KRT37O76014 449 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 ITGAXP20702 1163 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF280AP59817 542 aaPredicted RBP19.25■□□□□ 0.67
SCARF1-202ENST00000348987 CDK18Q07002 472 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 RSPH3Q86UC2 560 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 PQLC1Q8N2U9 271 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 FBXW8Q8N3Y1 598 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 DEPTORQ8TB45 409 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF778Q96MU6 729 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 UGT1A7Q9HAW7 530 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 UGT1A10Q9HAW8 530 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 UGT1A8Q9HAW9 530 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 APOBEC2Q9Y235 224 aaKnown RBP19.25■□□□□ 0.67
SCARF1-202ENST00000348987 TEX264Q9Y6I9 313 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 ITM2AO43736 263 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 DKC1O60832 514 aaKnown RBP eCLIP19.25■□□□□ 0.67
SCARF1-202ENST00000348987 TRPA1O75762 1119 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 KLHL2O95198 593 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 ATP5BP06576 529 aaKnown RBP19.25■□□□□ 0.67
SCARF1-202ENST00000348987 BPGMP07738 259 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 CDH2P19022 906 aaPredicted RBP19.25■□□□□ 0.67
SCARF1-202ENST00000348987 HDAC4P56524 1084 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 CNTN2Q02246 1040 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 TNFAIP1Q13829 316 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 LPIN1Q14693 890 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 KCNT1Q5JUK3 1230 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 ANKRD23Q86SG2 305 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 WDR75Q8IWA0 830 aaKnown RBP19.25■□□□□ 0.67
SCARF1-202ENST00000348987 CCDC33Q8N5R6 958 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 DNAJC16Q9Y2G8 782 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 CEPT1Q9Y6K0 416 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 AK5Q9Y6K8 562 aa19.25■□□□□ 0.67
SCARF1-202ENST00000348987 CSDE1O75534 798 aaKnown RBP19.24■□□□□ 0.67
SCARF1-202ENST00000348987 ITGBL1O95965 494 aaPredicted RBP19.24■□□□□ 0.67
SCARF1-202ENST00000348987 MMP8P22894 467 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 EIF4BP23588 611 aaKnown RBP19.24■□□□□ 0.67
SCARF1-202ENST00000348987 DCUN1D2Q6PH85 259 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 AHI1Q8N157 1196 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF280CQ8ND82 737 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 TRPM4Q8TD43 1214 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 DHX33Q9H6R0 707 aaKnown RBP19.24■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF696Q9H7X3 374 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 THAP1Q9NVV9 213 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 PLK2Q9NYY3 685 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 TUBGCP4Q9UGJ1 667 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 ITGA11Q9UKX5 1188 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 ARID2Q68CP9 1835 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 A0A1B0GTW7 788 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 TSHRP16473 764 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 PTPRAP18433 802 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 C1QBPQ07021 282 aaKnown RBP19.24■□□□□ 0.67
SCARF1-202ENST00000348987 C6orf52Q5T4I8 152 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 LRRC38Q5VT99 294 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 FRMD7Q6ZUT3 714 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 AMIGO2Q86SJ2 522 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 PPP1R14CQ8TAE6 165 aa19.24■□□□□ 0.67
SCARF1-202ENST00000348987 PIWIL2Q8TC59 973 aaKnown RBP19.24■□□□□ 0.67
SCARF1-202ENST00000348987 C1QAP02745 245 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 CD97P48960 835 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 DPYSL3Q14195 570 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 ZBTB33Q86T24 672 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 NDUFAF2Q8N183 169 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 TMEM130Q8N3G9 435 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 ZNF302Q9NR11 478 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 RAB26Q9ULW5 256 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 FAF1Q9UNN5 650 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-202ENST00000348987 COL11A1P12107 1806 aaPredicted RBP19.23■□□□□ 0.67
SCARF1-202ENST00000348987 OATP04181 439 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 PTPN7P35236 360 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 APOFQ13790 326 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 CYP4A22Q5TCH4 519 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 ALDH16A1Q8IZ83 802 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 SLC16A10Q8TF71 515 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 TFB1MQ8WVM0 346 aaKnown RBP19.23■□□□□ 0.67
SCARF1-202ENST00000348987 NLRP4Q96MN2 994 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 CGRRF1Q99675 332 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 MTMR12Q9C0I1 747 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 PSMD13Q9UNM6 376 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 CNTN6Q9UQ52 1028 aa19.23■□□□□ 0.67
SCARF1-202ENST00000348987 GNEQ9Y223 722 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms