RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 SLC6A3Q01959 620 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 RETSATQ6NUM9 610 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 CAPN10Q9HC96 672 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 ITGB5P18084 799 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 MGAT5Q09328 741 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 ITIH5Q86UX2 942 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 ZNF555Q8NEP9 628 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 EMILIN2Q9BXX0 1053 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 ULBP1Q9BZM6 244 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 PIK3CDO00329 1044 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 RNASEH1O60930 286 aaKnown RBP19.12■□□□□ 0.65
UBE3C-201ENST00000348165 RAP1GDS1P52306 607 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 KCNMA1Q12791 1236 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 FUT11Q495W5 492 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 OLFML2BQ68BL8 750 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 OOSP2Q86WS3 158 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 NT5DC4Q86YG4 428 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 HTR3CQ8WXA8 447 aa19.12■□□□□ 0.65
UBE3C-201ENST00000348165 ERI2A8K979 691 aaKnown RBP19.11■□□□□ 0.65
UBE3C-201ENST00000348165 CDH2P19022 906 aaPredicted RBP19.11■□□□□ 0.65
UBE3C-201ENST00000348165 MLH1P40692 756 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 ZDHHC17Q8IUH5 632 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 HDAC7Q8WUI4 952 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 ZNF333Q96JL9 665 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 PCDHA3Q9Y5H8 950 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 YBX3P16989 372 aaKnown RBP eCLIP19.11■□□□□ 0.651e-6■□□□□ 10.7
UBE3C-201ENST00000348165 SKOR1P84550 965 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 STX5Q13190 355 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 ELOVL4Q9GZR5 314 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 ZNF556Q9HAH1 456 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 DNAJC16Q9Y2G8 782 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 MT-CO1P00395 513 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 CKBP12277 381 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 CYLC2Q14093 348 aaPredicted RBP19.11■□□□□ 0.65
UBE3C-201ENST00000348165 NBPF20Q3BBV1 942 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 MYCBPAPQ8TBZ2 947 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 GIMAP4Q9NUV9 329 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 RRN3Q9NYV6 651 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 PPLO60437 1756 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 HMGCRP04035 888 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 ADRB2P07550 413 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 TFE3P19532 575 aaPredicted RBP19.11■□□□□ 0.65
UBE3C-201ENST00000348165 DNPEPQ9ULA0 475 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 NAALADL1Q9UQQ1 740 aa19.11■□□□□ 0.65
UBE3C-201ENST00000348165 ALOX15P16050 662 aaPredicted RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 RENBPP51606 427 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 WSCD1Q658N2 575 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SUGP1Q8IWZ8 645 aaKnown RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 JADE3Q92613 823 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 DNAJC19Q96DA6 116 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 CCDC126Q96EE4 140 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SERPINB11Q96P15 392 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 NRCAMQ92823 1304 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 CPA3P15088 417 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SERPINB3P29508 390 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SSTR1P30872 391 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 TBX2Q13207 712 aaPredicted RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 CCDC85BQ15834 202 aaPredicted RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 AASDHQ4L235 1098 aaPredicted RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 KCNT2Q6UVM3 1135 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 CES3Q6UWW8 571 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 TMEM134Q9H6X4 195 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 C10orf88Q9H8K7 445 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 LTFP02788 710 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 H2AFXP16104 143 aaPredicted RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 PECAM1P16284 738 aaPredicted RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 EPS8L1Q8TE68 723 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 OSGEPL1Q9H4B0 414 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 RHBDL2Q9NX52 303 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 EIF3LQ9Y262 564 aaKnown RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 KIF20BQ96Q89 1820 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 H2AFYO75367 372 aaKnown RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 NFICP08651 508 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 CDH17Q12864 832 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 DNAJC9Q8WXX5 260 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SRPK1Q96SB4 655 aaKnown RBP19.1■□□□□ 0.65
UBE3C-201ENST00000348165 RBBP8Q99708 897 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SYTL2Q9HCH5 934 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 TBC1D13Q9NVG8 400 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SHOC2Q9UQ13 582 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 SIK3Q9Y2K2 1263 aa19.1■□□□□ 0.65
UBE3C-201ENST00000348165 ITGB6P18564 788 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 RPL21P46778 160 aaKnown RBP19.09■□□□□ 0.65
UBE3C-201ENST00000348165 AQP5P55064 265 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 HPCAP84074 193 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 C3orf20Q8ND61 904 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 ABHD8Q96I13 439 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 HIC2Q96JB3 615 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 SENP6Q9GZR1 1112 aaPredicted RBP19.09■□□□□ 0.65
UBE3C-201ENST00000348165 TAS2R14Q9NYV8 317 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 SNUPNO95149 360 aaKnown RBP19.09■□□□□ 0.65
UBE3C-201ENST00000348165 GTF2BQ00403 316 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 COL9A3Q14050 684 aaPredicted RBP19.09■□□□□ 0.65
UBE3C-201ENST00000348165 CACHD1Q5VU97 1274 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 LGI2Q8N0V4 545 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 HES6Q96HZ4 224 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 CNDP1Q96KN2 507 aa19.09■□□□□ 0.65
UBE3C-201ENST00000348165 ANKZF1Q9H8Y5 726 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms