RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FAM111AQ96PZ2 611 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 CORO1BQ9BR76 489 aa11.21□□□□□ -0.61
CLCN6-202ENST00000346436 DDX43Q9NXZ2 648 aaKnown RBP11.21□□□□□ -0.61
CLCN6-202ENST00000346436 TSR3Q9UJK0 312 aaKnown RBP11.21□□□□□ -0.61
CLCN6-202ENST00000346436 APODP05090 189 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 GZMAP12544 262 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 ELNP15502 786 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 C11orf63Q6NUN7 778 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 HDDC3Q8N4P3 179 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 PPWD1Q96BP3 646 aaKnown RBP11.21□□□□□ -0.62
CLCN6-202ENST00000346436 SMARCD1Q96GM5 515 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 SERPINB11Q96P15 392 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 MRPL40Q9NQ50 206 aaKnown RBP11.21□□□□□ -0.62
CLCN6-202ENST00000346436 ZC3H7BQ9UGR2 993 aaKnown RBP11.21□□□□□ -0.62
CLCN6-202ENST00000346436 NDOR1Q9UHB4 597 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 DYRK1BQ9Y463 629 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF536O15090 1300 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 ARFGEF2Q9Y6D5 1785 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 TNFRSF8P28908 595 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 PRKCIP41743 596 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.62
CLCN6-202ENST00000346436 FANCEQ9HB96 536 aa11.21□□□□□ -0.62
CLCN6-202ENST00000346436 DMAP1Q9NPF5 467 aaPredicted RBP11.21□□□□□ -0.62
CLCN6-202ENST00000346436 GPR25O00155 361 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 TULP2O00295 520 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ADRB2P07550 413 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ETS1P14921 441 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 HPGDP15428 266 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 GNSP15586 552 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ITIH4Q14624 930 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 FBXL19Q6PCT2 694 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 METTL3Q86U44 580 aaKnown RBP11.2□□□□□ -0.62
CLCN6-202ENST00000346436 VPS37AQ8NEZ2 397 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ARNTL2Q8WYA1 636 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ASB7Q9H672 318 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 WHRNQ9P202 907 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 FRMPD4Q14CM0 1322 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 A0A088AWK7 358 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF10P21506 573 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-202ENST00000346436 KELP23276 732 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 SMARCB1Q12824 385 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 BOLA3Q53S33 107 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 GPR20Q99678 358 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF510Q9Y2H8 683 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 RBAK-RBAKDNI3L0D1 243 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ALPPL2P10696 532 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 AMD1P17707 334 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 MZF1P28698 734 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ZNF200P98182 395 aaPredicted RBP11.2□□□□□ -0.62
CLCN6-202ENST00000346436 KDELC2Q7Z4H8 507 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 SYTL1Q8IYJ3 562 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 MCOLN2Q8IZK6 566 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 PRELID2Q8N945 189 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 FBXO36Q8NEA4 188 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 CLMNQ96JQ2 1002 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 MANSC1Q9H8J5 431 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 GPATCH2LQ9NWQ4 482 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 CES2O00748 559 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 CCND1P24385 295 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 MED21Q13503 144 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 KRT72Q14CN4 511 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 MROH9Q5TGP6 573 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 PLPP4Q5VZY2 271 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 EFL1Q7Z2Z2 1120 aaKnown RBP11.2□□□□□ -0.62
CLCN6-202ENST00000346436 EPS8L1Q8TE68 723 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 CXorf40AQ8TE69 158 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 FAR2Q96K12 515 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 EXO5Q9H790 373 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 NINJ2Q9NZG7 142 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ZFATQ9P243 1243 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 ABCC6O95255 1503 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 KCPQ6ZWJ8 1503 aa11.2□□□□□ -0.62
CLCN6-202ENST00000346436 IRS2Q9Y4H2 1338 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 SOCS7O14512 581 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PYGBP11216 843 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TM4SF1P30408 202 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 SERPINA13PQ6UXR4 307 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 C15orf52Q6ZUT6 534 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 CPB2Q96IY4 423 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 GPN3Q9UHW5 284 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TRIM33Q9UPN9 1127 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 COL1A1P02452 1464 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 DNTTP04053 509 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 GLUD2P49448 558 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 OTUD4Q01804 1114 aaKnown RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 ATP13A4Q4VNC1 1196 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 FSCBQ5H9T9 825 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 FUKQ8N0W3 1084 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 CCNYL1Q8N7R7 359 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 NLGN2Q8NFZ4 835 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 AJAP1Q9UKB5 411 aaPredicted RBP11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PCDHA3Q9Y5H8 950 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 CNTNAP2Q9UHC6 1331 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PROSCO94903 275 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 TNNI3P19429 210 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 FECHP22830 423 aa11.19□□□□□ -0.62
CLCN6-202ENST00000346436 PSEN1P49768 467 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms