RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CCNG1P51959 295 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 FRG1Q14331 258 aaKnown RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 LCN1P1Q5VSP4 162 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 AADACL4Q5VUY2 407 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 LMBR1LQ6UX01 489 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 METTL23Q86XA0 190 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 GRAMD1CQ8IYS0 662 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 USP38Q8NB14 1042 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 OTUD7AQ8TE49 926 aaPredicted RBP6.32□□□□□ -1.4
VCAN-203ENST00000343200 GPKOWQ92917 476 aaPredicted RBP eCLIP6.32□□□□□ -1.4
VCAN-203ENST00000343200 TRPM5Q9NZQ8 1165 aa6.32□□□□□ -1.4
VCAN-203ENST00000343200 H3BN98 237 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 RAD51CO43502 376 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SERPINA1P01009 418 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PRH1P02810 166 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 YWHAQP27348 245 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PDIA3P30101 505 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 GJA9P57773 515 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 YWHAZP63104 245 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 EMC2Q15006 297 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ATP13A4Q4VNC1 1196 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 UMODL1Q5DID0 1318 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 EFHC2Q5JST6 749 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 KLHL35Q6PF15 583 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NAV3Q8IVL0 2385 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PPIL6Q8IXY8 311 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SFRP1Q8N474 314 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 BHLHE22Q8NFJ8 381 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 CLCC1Q96S66 551 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 OR2B2Q9GZK3 357 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 L2HGDHQ9H9P8 463 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NGRNQ9NPE2 291 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 FAM49BQ9NUQ9 324 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CLN6Q9NWW5 311 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NCKIPSDQ9NZQ3 722 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 STAP1Q9ULZ2 295 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ADCY10Q96PN6 1610 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 VDRP11473 427 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ETS2P15036 469 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ZNF37AP17032 561 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 RAB5BP61020 215 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ACTR2P61160 394 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CENPCQ03188 943 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ARHGAP15Q53QZ3 475 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ZMYM1Q5SVZ6 1142 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 TMEM270Q6UE05 265 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NCCRP1Q6ZVX7 275 aaPredicted RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 TRAPPC11Q7Z392 1133 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SLC25A41Q8N5S1 370 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PNKPQ96T60 521 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 MAGEE1Q9HCI5 957 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 HPS4Q9NQG7 708 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 A0A1B0GTH6 734 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 I3L521 148 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 DFFAO00273 331 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ALDH1A3P47895 512 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 TAF5Q15542 800 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 UGT3A1Q6NUS8 523 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 LRRC34Q8IZ02 419 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NEDD1Q8NHV4 660 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 FAR1Q8WVX9 515 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 WRNIP1Q96S55 665 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CATSPERZQ9NTU4 200 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 HPF1Q9NWY4 346 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NDUFAF4Q9P032 175 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 IRGMA1A4Y4 181 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CLCA1A8K7I4 914 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 METTL18O95568 372 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 MAPK7Q13164 816 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 EIF5AL1Q6IS14 154 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 UNC13DQ70J99 1090 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NLRP10Q86W26 655 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CHPFQ8IZ52 775 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 MCFD2Q8NI22 146 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 HDAC7Q8WUI4 952 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SPIRE2Q8WWL2 714 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 NEDD4LQ96PU5 975 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ADI1Q9BV57 179 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 KIAA1683Q9H0B3 1180 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PCDH18Q9HCL0 1135 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 PKP3Q9Y446 797 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 FLT4P35916 1363 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 C1orf196B1AJZ1 125 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 OR6B1O95007 311 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 SDC4P31431 198 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 MARSP56192 900 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 NAB2Q15742 525 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 KIZQ2M2Z5 673 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ASPRV1Q53RT3 343 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 STOX1Q6ZVD7 989 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 DNAAF5Q86Y56 855 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 EPS8L3Q8TE67 593 aaKnown RBP6.31□□□□□ -1.4
VCAN-203ENST00000343200 FAM111AQ96PZ2 611 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 GOLPH3Q9H4A6 298 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 TMBIM4Q9HC24 238 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CDH9Q9ULB4 789 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 CORO2BQ9UQ03 480 aa6.31□□□□□ -1.4
VCAN-203ENST00000343200 ADGRL3Q9HAR2 1447 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms