RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 NIPA1Q7RTP0 329 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 C12orf50Q8NA57 414 aaPredicted RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 MPP4Q96JB8 637 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 GRIP2Q9C0E4 1043 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SLC17A6Q9P2U8 582 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 PEX11AO75192 247 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 TOP3BO95985 862 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 TSTA3Q13630 321 aaPredicted RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 ACAP1Q15027 740 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 PPM1JQ5JR12 505 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 TRMT10BQ6PF06 316 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 PCDH20Q8N6Y1 951 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 WNK4Q96J92 1243 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 DCDC2Q9UHG0 476 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 MYH7BA7E2Y1 1941 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 RNF103O00237 685 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SH3BP5O60239 455 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SETSIPP0DME0 302 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 MAPK10P53779 464 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 HADHBP55084 474 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 GBE1Q04446 702 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 PDK2Q15119 407 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SEL1L3Q68CR1 1132 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 C16orf87Q6PH81 154 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 FAM183BPQ6ZVS7 135 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 PPP2R3CQ969Q6 453 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 TNIP3Q96KP6 325 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 RNF157Q96PX1 679 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SLC5A4Q9NY91 659 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SNTG2Q9NY99 539 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 KCNK4Q9NYG8 393 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 ERAP1Q9NZ08 941 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 ZNF212Q9UDV6 495 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 YDJCA8MPS7 323 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 C19orf81C9J6K1 198 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 SUPT7LO94864 414 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 ERBB2P04626 1255 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 HMBSP08397 361 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 CCDC130P13994 396 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 EPHA3P29320 983 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 MPP3Q13368 585 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 ARMC3Q5W041 872 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 ITPRIPL1Q6GPH6 555 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 WDR60Q8WVS4 1066 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 SPON2Q9BUD6 331 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 CAB39LQ9H9S4 337 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 MYH11P35749 1972 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 HBP1O60381 514 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 FKBP6O75344 327 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 TRUB2O95900 331 aaKnown RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 MYL3P08590 195 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 HSD17B4P51659 736 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 DGKDQ16760 1214 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 BNC2Q6ZN30 1099 aaPredicted RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 HPS6Q86YV9 775 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 ZNF786Q8N393 782 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 OR52K1Q8NGK4 314 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 OMDQ99983 421 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 EBF4Q9BQW3 602 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 DCUN1D5Q9BTE7 237 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 EPB41L4BQ9H329 900 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 WDR55Q9H6Y2 383 aaPredicted RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 PRPF4O43172 522 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 TSPAN3O60637 253 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 SERPINE1P05121 402 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 PAMP19021 973 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 CYLC2Q14093 348 aaPredicted RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 RALGPS1Q5JS13 557 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 C16orf89Q6UX73 402 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 UNC5BQ8IZJ1 945 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 B4GALNT2Q8NHY0 566 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 NDRG1Q92597 394 aaKnown RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 APBA2Q99767 749 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 EPAS1Q99814 870 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 EBF2Q9HAK2 575 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 BTBD7Q9P203 1132 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 LGALS13Q9UHV8 139 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 BARX2Q9UMQ3 279 aaPredicted RBP12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 ANGPTL3Q9Y5C1 460 aa12.78□□□□□ -0.36
SNRNP48-201ENST00000342415 IL1R2P27930 398 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 PSMB4P28070 264 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 EEF1DP29692 281 aaKnown RBP12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 FUT11Q495W5 492 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 C10orf82Q8WW14 230 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 SEC14L1Q92503 715 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 VPS33BQ9H267 617 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 ADNPQ9H2P0 1102 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 CCDC167Q9P0B6 97 aa12.77□□□□□ -0.36
SNRNP48-201ENST00000342415 SUN2Q9UH99 717 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms