RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 SNF8Q96H20 258 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 TMEM169Q96HH4 297 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 YME1L1Q96TA2 773 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 TRIM62Q9BVG3 475 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 HERC2P3Q9BVR0 1158 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 FBXO44Q9H4M3 255 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 CXXC1Q9P0U4 656 aaPredicted RBP21.99■■□□□ 1.11
VRK2-201ENST00000340157 GMIPQ9P107 970 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 RCOR3Q9P2K3 495 aaPredicted RBP21.99■■□□□ 1.11
VRK2-201ENST00000340157 NUDT5Q9UKK9 219 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 MAP3K6O95382 1288 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 RBP3P10745 1247 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 ATF2P15336 505 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 ATF6P18850 670 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 GBP1P32455 592 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 AIF1P55008 147 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 GBE1Q04446 702 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 SLC10A2Q12908 348 aaPredicted RBP21.98■■□□□ 1.11
VRK2-201ENST00000340157 UAP1Q16222 522 aaPredicted RBP21.98■■□□□ 1.11
VRK2-201ENST00000340157 EFHC2Q5JST6 749 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 NCBP2-AS2Q69YL0 99 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 DENND5BQ6ZUT9 1274 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 UNC45BQ8IWX7 931 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 CCDC89Q8N998 374 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 CASP10Q92851 521 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 SPATA17Q96L03 361 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 SMOC2Q9H3U7 446 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 ARHGEF4Q9NR80 690 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 SGK1O00141 431 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 MCF2LO15068 1137 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 IRAK2O43187 625 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 ADCY8P40145 1251 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 KIAA1841Q6NSI8 718 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 ZC3H18Q86VM9 953 aaKnown RBP21.98■■□□□ 1.11
VRK2-201ENST00000340157 MON1AQ86VX9 555 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 ADAM7Q9H2U9 754 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 SPG21Q9NZD8 308 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 SFMBT1Q9UHJ3 866 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 HEY1Q9Y5J3 304 aa21.98■■□□□ 1.11
VRK2-201ENST00000340157 PLXNA4Q9HCM2 1894 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 ZBBXA8MT70 800 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 AGPSO00116 658 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 MSI1O43347 362 aaKnown RBP21.97■■□□□ 1.11
VRK2-201ENST00000340157 GJB5O95377 273 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 ITIH2P19823 946 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 GLUD2P49448 558 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 ITGA8P53708 1063 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 NRLP54845 237 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 PPIGQ13427 754 aaKnown RBP eCLIP21.97■■□□□ 1.11
VRK2-201ENST00000340157 TKTL2Q9H0I9 626 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 WDCPQ9H6R7 721 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 PCDH9Q9HC56 1237 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 OGFRQ9NZT2 677 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 SNX10Q9Y5X0 201 aa21.97■■□□□ 1.11
VRK2-201ENST00000340157 PPFIA2O75334 1257 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 FGBP02675 491 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 ARL4AP40617 200 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 HTRA4P83105 476 aaPredicted RBP21.96■■□□□ 1.11
VRK2-201ENST00000340157 FPGSQ05932 587 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 DPYSQ14117 519 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 DDX53Q86TM3 631 aaKnown RBP21.96■■□□□ 1.11
VRK2-201ENST00000340157 LRRN4Q8WUT4 740 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 AAASQ9NRG9 546 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 H3BQF6 201 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 CREB3O43889 395 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 SEC24AO95486 1093 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 YWHAQP27348 245 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 DHX9Q08211 1270 aaKnown RBP21.96■■□□□ 1.11
VRK2-201ENST00000340157 CALCOCO2Q13137 446 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 P3H1Q32P28 736 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 TMEM240Q5SV17 173 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 FAM182AQ5T1J6 154 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 GIPC2Q8TF65 315 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 AUTS2Q8WXX7 1259 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 FAM129AQ9BZQ8 928 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 USP29Q9HBJ7 922 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 ARHGEF38Q9NXL2 777 aa21.96■■□□□ 1.11
VRK2-201ENST00000340157 H3BRJ5 948 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 ABLIM3O94929 683 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 IFNB1P01574 187 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 HSD17B3P37058 310 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 TAF10Q12962 218 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 RASIP1Q5U651 963 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 IZUMO3Q5VZ72 239 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 MSANTD2Q6P1R3 559 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 RFX8Q6ZV50 586 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 IQCKQ8N0W5 287 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 FAM71DQ8N9W8 422 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 FBXO32Q969P5 355 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 PRDM10Q9NQV6 1147 aa21.95■■□□□ 1.1
VRK2-201ENST00000340157 RTN3O95197 1032 aaPredicted RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 CHKAP35790 457 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 GGCXP38435 758 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 GPS1Q13098 491 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 ARTNQ5T4W7 220 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 DARS2Q6PI48 645 aaKnown RBP21.94■■□□□ 1.1
VRK2-201ENST00000340157 C7orf61Q8IZ16 206 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 CCHCR1Q8TD31 782 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 LRRC45Q96CN5 670 aa21.94■■□□□ 1.1
VRK2-201ENST00000340157 EPB41L4BQ9H329 900 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms