RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 CDH9Q9ULB4 789 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 KCNK1O00180 336 aa16■□□□□ 0.15
MBD1-203ENST00000339998 FAM155BO75949 473 aa16■□□□□ 0.15
MBD1-203ENST00000339998 ODC1P11926 461 aa16■□□□□ 0.15
MBD1-203ENST00000339998 KRT15P19012 456 aa16■□□□□ 0.15
MBD1-203ENST00000339998 AP1B1Q10567 949 aa16■□□□□ 0.15
MBD1-203ENST00000339998 NT5C3BQ969T7 300 aa16■□□□□ 0.15
MBD1-203ENST00000339998 TSPAN18Q96SJ8 248 aa16■□□□□ 0.15
MBD1-203ENST00000339998 BPTFQ12830 3046 aa16■□□□□ 0.15
MBD1-203ENST00000339998 LTFP02788 710 aa16■□□□□ 0.15
MBD1-203ENST00000339998 RPL9P32969 192 aaKnown RBP16■□□□□ 0.15
MBD1-203ENST00000339998 ARL4AP40617 200 aa16■□□□□ 0.15
MBD1-203ENST00000339998 YWHAGP61981 247 aaKnown RBP eCLIP16■□□□□ 0.15
MBD1-203ENST00000339998 INTS6LQ5JSJ4 861 aaKnown RBP16■□□□□ 0.15
MBD1-203ENST00000339998 CPLX4Q7Z7G2 160 aa16■□□□□ 0.15
MBD1-203ENST00000339998 DYDC1Q8WWB3 177 aa16■□□□□ 0.15
MBD1-203ENST00000339998 HHIPL1Q96JK4 782 aa16■□□□□ 0.15
MBD1-203ENST00000339998 NT5C1B-RDH14C9J2C7 533 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SOAT2O75908 522 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 VIMP08670 466 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 RDXP35241 583 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 RNASELQ05823 741 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 GRIK3Q13003 919 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 ZKSCAN8Q15776 578 aaPredicted RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 BSPRYQ5W0U4 402 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SMYD5Q6GMV2 418 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 PCGF5Q86SE9 256 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SRLQ86TD4 932 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 CAND1Q86VP6 1230 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 CEP57Q86XR8 500 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SMARCD1Q96GM5 515 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 ZNF317Q96PQ6 595 aaPredicted RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 SLC2A13Q96QE2 648 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 CNOT10Q9H9A5 744 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 FAM169AQ9Y6X4 670 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 C9IYK1 514 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 DRD4P21917 467 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 IFT88Q13099 833 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 TAOK1Q7L7X3 1001 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SCN4BQ8IWT1 228 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 TTC9BQ8N6N2 239 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 CCDC77Q9BR77 488 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 FRMD8P1Q9BZ68 369 aaPredicted RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 CASP8AP2Q9UKL3 1982 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 BCLAF3A2AJT9 711 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 MSI1O43347 362 aaKnown RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 PCSK1P29120 753 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SPRED3Q2MJR0 410 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 TCTN1Q2MV58 587 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SLC45A4Q5BKX6 768 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 UNC5BQ8IZJ1 945 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SPOCK2Q92563 424 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SIK2Q9H0K1 926 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 PRDM12Q9H4Q4 367 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 SFMBT1Q9UHJ3 866 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 GGT7Q9UJ14 662 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 STAP1Q9ULZ2 295 aa15.99■□□□□ 0.15
MBD1-203ENST00000339998 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
MBD1-203ENST00000339998 SHROOM3Q8TF72 1996 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 ADRA1BP35368 520 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 RAB27AP51159 221 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 SPARCL1Q14515 664 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 SLC39A12Q504Y0 691 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 RAB41Q5JT25 222 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 HEATR6Q6AI08 1181 aaKnown RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 FAM171BQ6P995 826 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 NPWQ8N729 165 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 ZNF296Q8WUU4 475 aaPredicted RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 THOC1Q96FV9 657 aaKnown RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 CHMP6Q96FZ7 201 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 PLAC1Q9HBJ0 212 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 ABI2Q9NYB9 513 aaPredicted RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 ZMYND8Q9ULU4 1186 aaPredicted RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 EEF2KO00418 725 aaKnown RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 UGT1A9O60656 530 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 F7P08709 466 aaPredicted RBP15.98■□□□□ 0.15
MBD1-203ENST00000339998 GRK4P32298 578 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 ARPP19P56211 112 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 GPNMBQ14956 572 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 DDR2Q16832 855 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 KBTBD12Q3ZCT8 623 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 ARCQ7LC44 396 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 BNIPLQ7Z465 357 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 TRABD2AQ86V40 505 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 DBF4BQ8NFT6 615 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 ACBD6Q9BR61 282 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 FOXP3Q9BZS1 431 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 TKTL2Q9H0I9 626 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 UGT1A7Q9HAW7 530 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 UGT1A10Q9HAW8 530 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 UGT1A8Q9HAW9 530 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 TBC1D13Q9NVG8 400 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 PAK5Q9P286 719 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 PDE4DIPQ5VU43 2346 aa15.98■□□□□ 0.15
MBD1-203ENST00000339998 TSC2P49815 1807 aa15.97■□□□□ 0.15
MBD1-203ENST00000339998 TCRBV9S1A1TA0A576 114 aa15.97■□□□□ 0.15
MBD1-203ENST00000339998 E7ESA3 106 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms