RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
MRPL55-203ENST00000336520 CEP83Q9Y592 693 aa11.84□□□□□ -0.51
MRPL55-203ENST00000336520 FHOD1Q9Y613 1164 aa11.84□□□□□ -0.51
MRPL55-203ENST00000336520 CFAP54Q96N23 3096 aa11.84□□□□□ -0.51
MRPL55-203ENST00000336520 MYO15AQ9UKN7 3530 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
MRPL55-203ENST00000336520 TSPAN3O60637 253 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 LATS1O95835 1130 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 PENKP01210 267 aaPredicted RBP11.83□□□□□ -0.52
MRPL55-203ENST00000336520 RPL34P49207 117 aaKnown RBP11.83□□□□□ -0.52
MRPL55-203ENST00000336520 SLC11A2P49281 568 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 TBX4P57082 545 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 MYL5Q02045 173 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 KCNMA1Q12791 1236 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 KRT31Q15323 416 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 MPPE1Q53F39 396 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 FKBP15Q5T1M5 1219 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 KLHDC7AQ5VTJ3 777 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 FYB2Q5VWT5 728 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 NUGGCQ68CJ6 796 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 SDE2Q6IQ49 451 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 TMEM92Q6UXU6 159 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 CACNA2D4Q7Z3S7 1137 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 SLC47A2Q86VL8 602 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 UNC45BQ8IWX7 931 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 FAM71AQ8IYT1 594 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
MRPL55-203ENST00000336520 KCNV2Q8TDN2 545 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 DQX1Q8TE96 717 aaKnown RBP11.83□□□□□ -0.52
MRPL55-203ENST00000336520 PPP1R13BQ96KQ4 1090 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 SERPINB11Q96P15 392 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 TPSD1Q9BZJ3 242 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 SYNCQ9H7C4 482 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.52
MRPL55-203ENST00000336520 EBF1Q9UH73 591 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 CYTH4Q9UIA0 394 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 USP18Q9UMW8 372 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 NAALADL1Q9UQQ1 740 aa11.83□□□□□ -0.52
MRPL55-203ENST00000336520 TCRBV21S2A2A0A5A6 115 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 PRRT4C9JH25 899 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 ZBTB24O43167 697 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 ADAM23O75077 832 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 FYNP06241 537 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 RETP07949 1114 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 CHRM1P11229 460 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 HOXB2P14652 356 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 UCHL3P15374 230 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 NTSR1P30989 418 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 GBP1P32455 592 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 CLCN1P35523 988 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 WASP42768 502 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 SNX16P57768 344 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 ZNF445P59923 1031 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 YWHAZP63104 245 aaKnown RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 TYRO3Q06418 890 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 RING1Q06587 406 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 USP39Q53GS9 565 aaKnown RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 ADGRF1Q5T601 910 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 EGFLAMQ63HQ2 1017 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 TMEM110Q86TL2 294 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 KBTBD6Q86V97 674 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 FAM217AQ8IXS0 508 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 PGBD3Q8N328 593 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 GPR161Q8N6U8 529 aaKnown RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 C1orf131Q8NDD1 294 aaKnown RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 MDGA1Q8NFP4 955 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 ADAM32Q8TC27 787 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 HMGB4Q8WW32 186 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 P2RY11Q96G91 374 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 CPXM1Q96SM3 734 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 NAT10Q9H0A0 1025 aaKnown RBP11.82□□□□□ -0.52
MRPL55-203ENST00000336520 LHX5Q9H2C1 402 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 POPDC2Q9HBU9 364 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 PCDHGC3Q9UN70 934 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 INVSQ9Y283 1065 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 SLC27A6Q9Y2P4 619 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 STARD13Q9Y3M8 1113 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 SDK1Q7Z5N4 2213 aa11.82□□□□□ -0.52
MRPL55-203ENST00000336520 IGLV3-27P01718 113 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 CISD3P0C7P0 127 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 HNRNPLP14866 589 aaKnown RBP eCLIP11.81□□□□□ -0.52
MRPL55-203ENST00000336520 CYP11B1P15538 503 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 CDK11BP21127 795 aaKnown RBP11.81□□□□□ -0.52
MRPL55-203ENST00000336520 COPB1P53618 953 aaKnown RBP11.81□□□□□ -0.52
MRPL55-203ENST00000336520 SPEM2Q0P670 501 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 NNTQ13423 1086 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 ELF2Q15723 593 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 SYPL2Q5VXT5 272 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 DPY19L2P1Q6NXN4 242 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 BEND5Q7L4P6 421 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 ANKS1BQ7Z6G8 1248 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 TAC4Q86UU9 113 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 RASSF3Q86WH2 238 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 UCMAQ8WVF2 138 aa11.81□□□□□ -0.52
MRPL55-203ENST00000336520 TMA16Q96EY4 203 aaKnown RBP11.81□□□□□ -0.52
MRPL55-203ENST00000336520 DDX50Q9BQ39 737 aaKnown RBP11.81□□□□□ -0.52
MRPL55-203ENST00000336520 SLC2A11Q9BYW1 496 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms