RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 MROH9Q5TGP6 573 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 IQSEC1Q6DN90 963 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 CASC4Q6P4E1 433 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 ARMC2Q8NEN0 867 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 TMEM40Q8WWA1 233 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 HTR3CQ8WXA8 447 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 LGMNQ99538 433 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 TACO1Q9BSH4 297 aaKnown RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 HUS1O60921 280 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 TOMM70O94826 608 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 GSTA2P09210 222 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 SERPINB3P29508 390 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 SCNN1AP37088 669 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 GTF2A2P52657 109 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 SOX4Q06945 474 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 DEFB106AQ8N104 65 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 NETO2Q8NC67 525 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 NSMCE1Q8WV22 266 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 N4BP2L2Q92802 583 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 LENG1Q96BZ8 264 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 SAR1AQ9NR31 198 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 FBXO6Q9NRD1 293 aaPredicted RBP18.3■□□□□ 0.52
LRCH3-201ENST00000334859 C15orf41Q9Y2V0 281 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 PLLPQ9Y342 182 aa18.3■□□□□ 0.52
LRCH3-201ENST00000334859 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SMIM35A0A1B0GVV1 85 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 C2orf71A6NGG8 1288 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 XPOTO43592 962 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 MFSD11O43934 449 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 RFPL1O75677 317 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 F2P00734 622 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 VAV1P15498 845 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PNPLA4P41247 253 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 MATKP42679 507 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 MRPS5P82675 430 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SEMA5AQ13591 1074 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PDCD11Q14690 1871 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 CTC1Q2NKJ3 1217 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SV2CQ496J9 727 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 DCAF6Q58WW2 860 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 EFHC1Q5JVL4 640 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PRAMEF19Q5SWL8 479 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 ARCQ7LC44 396 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 STRADAQ7RTN6 431 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PLEKHH3Q7Z736 793 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PIGZQ86VD9 579 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 GPATCH11Q8N954 259 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 FAM13CQ8NE31 585 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 TNIP3Q96KP6 325 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 HSFY1Q96LI6 401 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 GDAP2Q9NXN4 497 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 MYO18AQ92614 2054 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 WFS1O76024 890 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 DLDP09622 509 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SLC8A3P57103 927 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SARNPP82979 210 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 TMPRSS15P98073 1019 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 CDK16Q00536 496 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 SNX17Q15036 470 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PCBP1Q15365 356 aaKnown RBP eCLIP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 ANKRD20A2Q5SQ80 823 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 ANKRD20A1Q5TYW2 823 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 ANKRD20A3Q5VUR7 823 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 MTBPQ96DY7 904 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 ARHGEF4Q9NR80 690 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PIH1D1Q9NWS0 290 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 MTO1Q9Y2Z2 717 aaKnown RBP18.29■□□□□ 0.52
LRCH3-201ENST00000334859 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
LRCH3-201ENST00000334859 A0A0A0MRY4 1105 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 FAM159BA6NKW6 160 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 DIAPH2O60879 1101 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 TGDSO95455 350 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 MYL2P10916 166 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 PTPN4P29074 926 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 CRADDP78560 199 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 SLC25A52Q3SY17 297 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 BSPRYQ5W0U4 402 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 NDUFAF2Q8N183 169 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 APBB2Q92870 758 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 SPATA13Q96N96 652 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 OLFM3Q96PB7 478 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 CEP41Q9BYV8 373 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 KCNK13Q9HB14 408 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 TMPRSS4Q9NRS4 437 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 SEPT10Q9P0V9 454 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 USP3Q9Y6I4 520 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 WDR27A2RRH5 827 aa18.28■□□□□ 0.52
LRCH3-201ENST00000334859 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
LRCH3-201ENST00000334859 TRAFD1O14545 582 aaPredicted RBP18.28■□□□□ 0.52
LRCH3-201ENST00000334859 XPO1O14980 1071 aaKnown RBP18.28■□□□□ 0.52
LRCH3-201ENST00000334859 STK10O94804 968 aaKnown RBP18.28■□□□□ 0.52
LRCH3-201ENST00000334859 ACAT1P24752 427 aaKnown RBP18.28■□□□□ 0.52
LRCH3-201ENST00000334859 CCNFP41002 786 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms