RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TSEN2Q8NCE0 465 aaKnown RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ZSWIM2Q8NEG5 633 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ITFG1Q8TB96 612 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 WRNIP1Q96S55 665 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 TRNAU1APQ9NX07 287 aaKnown RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 KDM5CP41229 1560 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 HOXD10P28358 340 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 LTKP29376 864 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 GRK3P35626 688 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 SLC26A3P40879 764 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 RPL21P46778 160 aaKnown RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 SPOCD1Q6ZMY3 1216 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ZCCHC23Q6ZST2 131 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ZDHHC13Q8IUH4 622 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ELOA2Q8IYF1 753 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF671Q8TAW3 534 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 CAMKK2Q96RR4 588 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 NMRK2Q9NPI5 230 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 NINJ2Q9NZG7 142 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 PNMA3Q9UL41 463 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ACOT9Q9Y305 439 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 H3BN98 237 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 SNAP23O00161 211 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 CLTBP09497 229 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 STAT5AP42229 794 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 STAT5BP51692 787 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 PTENP60484 403 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 PRKAA1Q13131 559 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 MYBPC2Q14324 1141 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 C5orf22Q49AR2 442 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ACOX2Q99424 681 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 FLT1P17948 1338 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 LIN7AO14910 233 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 CYBBP04839 570 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ITGA4P13612 1032 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 NR6A1Q15406 480 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 SLC22A9Q8IVM8 553 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF276Q8N554 614 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 GPAMQ9HCL2 828 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 CFAP74Q9C0B2 1584 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 FOXN3O00409 490 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ALOX5P09917 674 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 DARSP14868 501 aaKnown RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ETS1P14921 441 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 GRAPQ13588 217 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 TTLL4Q14679 1199 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 PMF1Q6P1K2 205 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 RASSF6Q6ZTQ3 369 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 SYNE4Q8N205 404 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 FBXW8Q8N3Y1 598 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 GRAPLQ8TC17 118 aaPredicted RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 DLG3Q92796 817 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 APBB2Q92870 758 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 B3GALT6Q96L58 329 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 DPY30Q9C005 99 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 LRMDAQ9H2I8 198 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 DMTF1Q9Y222 760 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 AK5Q9Y6K8 562 aa10.05□□□□□ -0.8
COL4A6-201ENST00000334504 ATXN2Q99700 1313 aaKnown RBP10.05□□□□□ -0.8
COL4A6-201ENST00000334504 GNG14A0A1W2PPG7 69 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ADSSP30520 456 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 YWHAZP63104 245 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF544Q6NX49 715 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 FAM9CQ8IZT9 166 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 PARP8Q8N3A8 854 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 PHF21BQ96EK2 531 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SLITRK2Q9H156 845 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 GPATCH2LQ9NWQ4 482 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 F5H6K3 240 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 EXTL3O43909 919 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ARL4DP49703 201 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 FOLH1Q04609 750 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 KLRC3Q07444 240 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TTLL9Q3SXZ7 439 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ZIK1Q3SY52 487 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 TIMM50Q3ZCQ8 353 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 MTG1Q9BT17 334 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CINPQ9BW66 212 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SF3B1O75533 1304 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ERVV-1B6SEH8 477 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CNPP09543 421 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 NCAM1P13591 858 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ALADP13716 330 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CBX3Q13185 183 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SPIDRQ14159 915 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 GSTA3Q16772 222 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 FGD3Q5JSP0 725 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SAMD4BQ5PRF9 694 aaKnown RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ABRAXAS1Q6UWZ7 409 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 DHDDSQ86SQ9 333 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 SEPT12Q8IYM1 358 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CAMKK1Q8N5S9 505 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 BORCS5Q969J3 196 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 JPH1Q9HDC5 661 aaPredicted RBP10.04□□□□□ -0.8
COL4A6-201ENST00000334504 ZNF446Q9NWS9 450 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 CCDC167Q9P0B6 97 aa10.04□□□□□ -0.8
COL4A6-201ENST00000334504 PIN4Q9Y237 131 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms