RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 PPM1NQ8N819 430 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 ACTL9Q8TC94 416 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 DCPSQ96C86 337 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 PTCD3Q96EY7 689 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 ZNF512Q96ME7 567 aaPredicted RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 HNRNPABQ99729 332 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 HERC2P3Q9BVR0 1158 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 IDI2Q9BXS1 227 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 GNEQ9Y223 722 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A9O60656 530 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 PSMC3P17980 439 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A6P19224 532 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A1P22309 533 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A4P22310 534 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 GLRA2P23416 452 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 EEF1B2P24534 225 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 PSMA2P25787 234 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 EEF1DP29692 281 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A3P35503 534 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A5P35504 534 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 VPS72Q15906 364 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 SNX29P2Q8IUI4 249 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 MSTO1Q9BUK6 570 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 SNX25Q9H3E2 840 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A7Q9HAW7 530 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A10Q9HAW8 530 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 UGT1A8Q9HAW9 530 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 TXNDC16Q9P2K2 825 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 LGALS13Q9UHV8 139 aa12.24□□□□□ -0.45
LIMK2-202ENST00000333611 AGO2Q9UKV8 859 aaKnown RBP12.24□□□□□ -0.45
LIMK2-202ENST00000333611 ADAMTSL1Q8N6G6 1762 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 TAF4O00268 1085 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 CRTAMO95727 393 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 NAT2P11245 290 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 PPARGP37231 505 aaPredicted RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 NR1H2P55055 460 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 GDF10P55107 478 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 EIF3EP60228 445 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 LMNB2Q03252 620 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 NME3Q13232 169 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SF3B4Q15427 424 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■■■□ 22.4
LIMK2-202ENST00000333611 CHI3L2Q15782 390 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 CDO1Q16878 200 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SPOCD1Q6ZMY3 1216 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 GPR141Q7Z602 305 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 CROCCP3Q8IVE0 287 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 HAUS8Q9BT25 410 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 RNF38Q9H0F5 515 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 TRPV6Q9H1D0 765 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 GIMAP4Q9NUV9 329 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 EBF1Q9UH73 591 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 E9PBE3 544 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 FAM155BO75949 473 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 MAP4P27816 1152 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 GCAP28676 217 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 HMOX2P30519 316 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 PKNOX1P55347 436 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 CUL2Q13617 745 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 EML3Q32P44 896 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 MSS51Q4VC12 460 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 FNBP1LQ5T0N5 605 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 BBS5Q8N3I7 341 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 OR5B17Q8NGF7 314 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 TAMM41Q96BW9 452 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 CCDC28BQ9BUN5 200 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 STRA6Q9BX79 667 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 MRPS26Q9BYN8 205 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 PARVAQ9NVD7 372 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 POU2F3Q9UKI9 436 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 PTPRJQ12913 1337 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 TNPO2O14787 897 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 DHX15O43143 795 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 AVILO75366 819 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 NUP107P57740 925 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 TFAMQ00059 246 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SPIDRQ14159 915 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 NEDD8Q15843 81 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 RGS21Q2M5E4 152 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 TAS2R42Q7RTR8 314 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 MAP4K3Q8IVH8 894 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 EXD1Q8NHP7 514 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 MASTLQ96GX5 879 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SLITRK1Q96PX8 696 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SH3GL1Q99961 368 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 EPS8L2Q9H6S3 715 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 XPO7Q9UIA9 1087 aaKnown RBP12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SOX13Q9UN79 622 aa12.23□□□□□ -0.45
LIMK2-202ENST00000333611 SBF2Q86WG5 1849 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 A0A1W2PPW3 197 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 TCRBV7S3A2A0A539 114 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 PSMD12O00232 456 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 COPEO14579 308 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 CYP2C9P11712 490 aa12.22□□□□□ -0.45
LIMK2-202ENST00000333611 CDH2P19022 906 aaPredicted RBP12.22□□□□□ -0.45
LIMK2-202ENST00000333611 SOX11P35716 441 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms