RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 C2CD4BA6NLJ0 364 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 STK10O94804 968 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 IL18RAPO95256 599 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 MAP3K10Q02779 954 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 RASSF3Q86WH2 238 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 COLGALT1Q8NBJ5 622 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 TEKT4Q8WW24 435 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 NRDE2Q9H7Z3 1164 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 XAB2Q9HCS7 855 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 NDE1Q9NXR1 346 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 TCRBV5S1A1TA0A578 114 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 B4GALT4O60513 344 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 DLDP09622 509 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 CYP3A5P20815 502 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 SLC34A1Q06495 639 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 RABGAP1LQ5R372 815 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 RIPOR1Q6ZS17 1223 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 ZNF669Q96BR6 464 aaPredicted RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 OSMRQ99650 979 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 FERMT1Q9BQL6 677 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 ZCWPW1Q9H0M4 648 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 PPCSQ9HAB8 311 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 SPATS2LQ9NUQ6 558 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 SETD4Q9NVD3 440 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 PLLPQ9Y342 182 aa12.19□□□□□ -0.46
EFCAB13-201ENST00000331493 TPP1O14773 563 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ITM2AO43736 263 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 HSPA4LO95757 839 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 LMNAP02545 664 aaKnown RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PROCP04070 461 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SULT1E1P49888 294 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 MBTD1Q05BQ5 628 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 USP4Q13107 963 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PRKD1Q15139 912 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 RALGPS1Q5JS13 557 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TSHZ1Q6ZSZ6 1077 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CDKL3Q8IVW4 592 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TRIM42Q8IWZ5 723 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SHKBP1Q8TBC3 707 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SYT15Q9BQS2 421 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TUBGCP4Q9UGJ1 667 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TIMM13Q9Y5L4 95 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SLC15A5A6NIM6 579 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CLDN5O00501 218 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 AIM2O14862 343 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ATP6V1C1P21283 382 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 BLMHQ13867 455 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CTU1Q7Z7A3 348 aaKnown RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CAND1Q86VP6 1230 aaKnown RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CCDC185Q8N715 623 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 NIPA2Q8N8Q9 360 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SGF29Q96ES7 293 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CAB39LQ9H9S4 337 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 NUP205Q92621 2012 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PAPSS1O43252 624 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ATG7O95352 703 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 GNAT1P11488 350 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 AVPR1AP37288 418 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ADCYAP1R1P41586 468 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 GHRHRQ02643 423 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 HIC1Q14526 733 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ILDR2Q71H61 639 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TTC30AQ86WT1 665 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 GSDMBQ8TAX9 411 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SLC2A14Q8TDB8 520 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PHACTR1Q9C0D0 580 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 C20orf27Q9GZN8 174 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 LRRC4Q9HBW1 653 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 QSER1Q2KHR3 1735 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 DCXO43602 365 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SORBS2O94875 1100 aaKnown RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 RPS12P25398 132 aaKnown RBP12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PSMB4P28070 264 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 NEK3P51956 506 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 SLC6A3Q01959 620 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 ASPHQ12797 758 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 KCNJ11Q14654 390 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 DPP9Q86TI2 863 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 TP53INP2Q8IXH6 220 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PQLC3Q8N755 202 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 MCRS1Q96EZ8 462 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 PIDD1Q9HB75 910 aa12.18□□□□□ -0.46
EFCAB13-201ENST00000331493 CHADO15335 359 aa12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 USP2O75604 605 aaPredicted RBP12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 SMNDC1O75940 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 LMO2P25791 158 aa12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 SERPINB5P36952 375 aa12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 ZNF280AP59817 542 aaPredicted RBP12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 DCLK2Q8N568 766 aa12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 SIK2Q9H0K1 926 aa12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 KCNK13Q9HB14 408 aa12.17□□□□□ -0.46
EFCAB13-201ENST00000331493 POPDC2Q9HBU9 364 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms