RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PIGVQ9NUD9 493 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 DDIT4Q9NX09 232 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 SORCS3Q9UPU3 1222 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 MIA3Q5JRA6 1907 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 CHADO15335 359 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 HMBSP08397 361 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 SDC4P31431 198 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 ZNF143P52747 638 aaPredicted RBP16.7■□□□□ 0.26
LRRC28-202ENST00000331450 C15orf59Q2T9L4 293 aaPredicted RBP16.7■□□□□ 0.26
LRRC28-202ENST00000331450 DCUN1D2Q6PH85 259 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 STRADAQ7RTN6 431 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 OSCP1Q8WVF1 389 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 CENPIQ92674 756 aaPredicted RBP16.7■□□□□ 0.26
LRRC28-202ENST00000331450 UHRF1Q96T88 793 aaPredicted RBP16.7■□□□□ 0.26
LRRC28-202ENST00000331450 TRMT61BQ9BVS5 477 aaKnown RBP16.7■□□□□ 0.26
LRRC28-202ENST00000331450 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
LRRC28-202ENST00000331450 DUSP12Q9UNI6 340 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 SH3BP1Q9Y3L3 701 aa16.7■□□□□ 0.26
LRRC28-202ENST00000331450 SCAMP3O14828 347 aaKnown RBP16.69■□□□□ 0.26
LRRC28-202ENST00000331450 CCP110O43303 1012 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 NARSO43776 548 aaKnown RBP16.69■□□□□ 0.26
LRRC28-202ENST00000331450 LATS1O95835 1130 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 SRFP11831 508 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 CORO1AP31146 461 aaKnown RBP16.69■□□□□ 0.26
LRRC28-202ENST00000331450 GDI1P31150 447 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 GBP1P32455 592 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 MAGEA1P43355 309 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 CXCR3P49682 368 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 PPP2R5DQ14738 602 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 TCEAL1Q15170 157 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 SPA17Q15506 151 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 EML3Q32P44 896 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 RAB6CQ53S08 254 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 SH3PXD2AQ5TCZ1 1133 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 NUGGCQ68CJ6 796 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 BBS7Q8IWZ6 715 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 FAM217AQ8IXS0 508 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 OTUB2Q96DC9 234 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 CNPY3Q9BT09 278 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 NUP85Q9BW27 656 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 DCLK3Q9C098 648 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 RAB6CQ9H0N0 254 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 TRPV5Q9NQA5 729 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 SLC2A4RGQ9NR83 387 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 THG1LQ9NWX6 298 aaKnown RBP16.69■□□□□ 0.26
LRRC28-202ENST00000331450 TBC1D14Q9P2M4 693 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 UVRAGQ9P2Y5 699 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 STOML2Q9UJZ1 356 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 PCDHA13Q9Y5I0 950 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 WNT6Q9Y6F9 365 aa16.69■□□□□ 0.26
LRRC28-202ENST00000331450 KCNU1A8MYU2 1149 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 SLC9A3R1O14745 358 aaPredicted RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 ARHGAP6O43182 974 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 MTA2O94776 668 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 F9P00740 461 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 RDXP35241 583 aaKnown RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 ATXN1P54253 815 aaKnown RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 HDAC4P56524 1084 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 ATP11AP98196 1134 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 DEUP1Q05D60 604 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 NME3Q13232 169 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 PDGFRLQ15198 375 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 ZC3H12AQ5D1E8 599 aaKnown RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 CC2D1AQ6P1N0 951 aaPredicted RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 UNC45BQ8IWX7 931 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 YAF2Q8IY57 180 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 ACRBPQ8NEB7 543 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 TTC16Q8NEE8 873 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 ZNF564Q8TBZ8 553 aaPredicted RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 RFFLQ8WZ73 363 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 DNASE1L2Q92874 299 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 AZIN2Q96A70 460 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 PPP1R9BQ96SB3 815 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 HPS4Q9NQG7 708 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 TMEM51Q9NW97 253 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 AGO1Q9UL18 857 aaKnown RBP16.68■□□□□ 0.26
LRRC28-202ENST00000331450 MYOFQ9NZM1 2061 aa16.68■□□□□ 0.26
LRRC28-202ENST00000331450 SYNJ2BP-COX16A0A087WUM0 186 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 RCCD1A6NED2 376 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 I6L893 689 aaPredicted RBP16.67■□□□□ 0.26
LRRC28-202ENST00000331450 GFRA2O00451 464 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 IPO7O95373 1038 aaKnown RBP16.67■□□□□ 0.26
LRRC28-202ENST00000331450 SLC2A3P11169 496 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 CCR1P32246 355 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 IFNAR2P48551 515 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 HARS2P49590 506 aaKnown RBP16.67■□□□□ 0.26
LRRC28-202ENST00000331450 VAV2P52735 878 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 CDO1Q16878 200 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 TRIM68Q6AZZ1 485 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 DENND1CQ8IV53 801 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 RHOT2Q8IXI1 618 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 NIPA2Q8N8Q9 360 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 FAM172AQ8WUF8 416 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 IRF7Q92985 503 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 DESI2Q9BSY9 194 aa16.67■□□□□ 0.26
LRRC28-202ENST00000331450 LINC00597Q9H2U6 94 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms