RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 C5orf42Q9H799 3197 aa16.46■□□□□ 0.22
PDGFB-201ENST00000331163 NCANO14594 1321 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 TRIM43BA6NCK2 446 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 APOL1O14791 398 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 ZNF623O75123 536 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 BANF1O75531 89 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 ARHGEF18Q6ZSZ5 1173 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 RNF135Q8IUD6 432 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 IQCKQ8N0W5 287 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 RYBPQ8N488 228 aaPredicted RBP16.45■□□□□ 0.22
PDGFB-201ENST00000331163 TRIM43Q96BQ3 446 aaPredicted RBP16.45■□□□□ 0.22
PDGFB-201ENST00000331163 MRPL9Q9BYD2 267 aaKnown RBP16.45■□□□□ 0.22
PDGFB-201ENST00000331163 ATXN3LQ9H3M9 355 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 POPDC2Q9HBU9 364 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 MLXIPLQ9NP71 852 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 TMEM30AQ9NV96 361 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 DSEQ9UL01 958 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 USP12O75317 370 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 YWHAQP27348 245 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 VCPP55072 806 aaKnown RBP16.45■□□□□ 0.22
PDGFB-201ENST00000331163 PLEKHG4Q58EX7 1191 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 IZUMO3Q5VZ72 239 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 SLC35F5Q8WV83 523 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 SEC16BQ96JE7 1060 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 CORO1BQ9BR76 489 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 SAYSD1Q9NPB0 183 aa16.45■□□□□ 0.22
PDGFB-201ENST00000331163 CCDC188H7C350 402 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 VIMP08670 466 aaKnown RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 ZNF143P52747 638 aaPredicted RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 SESN2P58004 480 aaPredicted RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 MAPRE1Q15691 268 aaKnown RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 PCSK7Q16549 785 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 C16orf59Q7L2K0 433 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 SPRED2Q7Z698 418 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 CFAP36Q96G28 342 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 CYP2S1Q96SQ9 504 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 LGMNQ99538 433 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 KIF9Q9HAQ2 790 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 OGDHLQ9ULD0 1010 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 ATP2A2P16615 1042 aaKnown RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 HSD17B3P37058 310 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 ZNF132P52740 706 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 TAP1Q03518 808 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 MRPL17Q9NRX2 175 aaKnown RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 GKN1Q9NS71 199 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 RNF14Q9UBS8 474 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 L3MBTL1Q9Y468 752 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 LCTP09848 1927 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 PHF2O75151 1096 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 ACCSLQ4AC99 568 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 GKAP1Q5VSY0 366 aaPredicted RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 HEATR6Q6AI08 1181 aaKnown RBP16.44■□□□□ 0.22
PDGFB-201ENST00000331163 ALKAL1Q6UXT8 129 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 VCPIP1Q96JH7 1222 aa16.44■□□□□ 0.22
PDGFB-201ENST00000331163 KDELR1P24390 212 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 GCKP35557 465 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 GJA8P48165 433 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 ROR1Q01973 937 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 GBE1Q04446 702 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 TFDP2Q14188 446 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 SPARCL1Q14515 664 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 TRIM71Q2Q1W2 868 aaKnown RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 TPGS1Q6ZTW0 290 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 LHX5Q9H2C1 402 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 PCDHGC3Q9UN70 934 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 STK38LQ9Y2H1 464 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 HMGB1P1B2RPK0 211 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 XPO1O14980 1071 aaKnown RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 APOEP02649 317 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 LRG1P02750 347 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 PECAM1P16284 738 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 INCA1Q0VD86 236 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 RFWD3Q6PCD5 774 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 SPATS2Q86XZ4 545 aaKnown RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 PALM2Q8IXS6 379 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 MIEF2Q96C03 454 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 HNRNPABQ99729 332 aaKnown RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 XPO7Q9UIA9 1087 aaKnown RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 IKBKGQ9Y6K9 419 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 CCL16O15467 120 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 MBL2P11226 248 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 CBX2Q14781 532 aaPredicted RBP16.43■□□□□ 0.22
PDGFB-201ENST00000331163 ERMARDQ5T6L9 678 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 PPP1R2P3Q6NXS1 205 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 TTC27Q6P3X3 843 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 MAIP1Q8WWC4 291 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 ING5Q8WYH8 240 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 CAVIN3Q969G5 261 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 ATXN7L3BQ96GX2 97 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 OR12D3Q9UGF7 316 aa16.43■□□□□ 0.22
PDGFB-201ENST00000331163 A6NNZ2 444 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 LRPAP1P30533 357 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 CHRNA3P32297 505 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ITGA8P53708 1063 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 FPGSQ05932 587 aa16.42■□□□□ 0.22
PDGFB-201ENST00000331163 ZNF252P-AS1Q0IIN9 211 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms