RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 NFIL3Q16649 462 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SCARA3Q6AZY7 606 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PACS2Q86VP3 889 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 TEX47Q8TBZ9 253 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ATP9AO75110 1047 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 CSN2P05814 226 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 CACNB1Q02641 598 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 CYP51A1Q16850 503 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GABBR1Q9UBS5 961 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ZNF135P52742 658 aaPredicted RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GIT2Q14161 759 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 CLCA4Q14CN2 919 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 FAM162AQ96A26 154 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ERP44Q9BS26 406 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DDX47Q9H0S4 455 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ENO1P06733 434 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 NUDT7P0C024 238 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 COTL1Q14019 142 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ZMYND11Q15326 602 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PROSER3Q2NL68 480 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PID1Q7Z2X4 250 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 MMGT1Q8N4V1 131 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SLC20A1Q8WUM9 679 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DSN1Q9H410 356 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 EXO5Q9H790 373 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PCMTD2Q9NV79 361 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 NDUFAF4Q9P032 175 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DRG1Q9Y295 367 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 C5orf51A6NDU8 294 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 H3BNX3 289 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 DFFAO00273 331 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 PRKAB2O43741 272 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 GEMIN4P57678 1058 aaKnown RBP9.97□□□□□ -0.81
COL12A1-201ENST00000322507 XKRXQ6PP77 449 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 ERGIC2Q96RQ1 377 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 SQORQ9Y6N5 450 aa9.97□□□□□ -0.81
COL12A1-201ENST00000322507 RXRBP28702 533 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 CHKAP35790 457 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 ARF5P84085 180 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SWT1Q5T5J6 900 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SLC35G2Q8TBE7 412 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 FRMD6Q96NE9 622 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 NEDD4LQ96PU5 975 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 UNKQ9C0B0 810 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 HSPBP1Q9NZL4 362 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 RGSL1A5PLK6 1076 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 NPTX2P47972 431 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 CNTN1Q12860 1018 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 WDR93Q6P2C0 686 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 NOTUMQ6P988 496 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 COL23A1Q86Y22 540 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 ILKAPQ9H0C8 392 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 ARMC7Q9H6L4 198 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 FNDC3AQ9Y2H6 1198 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 NEDD4P46934 1319 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 AIPO00170 330 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 LSM8O95777 96 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 F9P00740 461 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 FSHRP23945 695 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 EIF5AP63241 154 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 TGM3Q08188 693 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SLITRK1Q96PX8 696 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 EMILIN2Q9BXX0 1053 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 DBNDD1Q9H9R9 158 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SETD4Q9NVD3 440 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SRP68Q9UHB9 627 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 TPRKBQ9Y3C4 175 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 PI4K2BG5E9Z4 385 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 ITGB3P05106 788 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 PTK7Q13308 1070 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SLC15A2Q16348 729 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 PREPLQ4J6C6 727 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 STRIP1Q5VSL9 837 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SYCE2Q6PIF2 218 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 ARID3BQ8IVW6 561 aaPredicted RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 HDDC3Q8N4P3 179 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 SLC7A5P2Q9GIP4 190 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 MARCH7Q9H992 704 aa9.96□□□□□ -0.81
COL12A1-201ENST00000322507 ZC3H4Q9UPT8 1303 aaKnown RBP9.96□□□□□ -0.81
COL12A1-201ENST00000322507 MYL3P08590 195 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 ITGALP20701 1170 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 GYS2P54840 703 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
COL12A1-201ENST00000322507 RMND5AQ9H871 391 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 TDRKHQ9Y2W6 561 aaKnown RBP9.96□□□□□ -0.82
COL12A1-201ENST00000322507 CHD4Q14839 1912 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 F5H6K3 240 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 TMEM253P0C7T8 217 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 UCHL3P15374 230 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 KLRC3Q07444 240 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 GSTA3Q16772 222 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 DCP1BQ8IZD4 617 aaKnown RBP9.96□□□□□ -0.82
COL12A1-201ENST00000322507 LATS2Q9NRM7 1088 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 CROTQ9UKG9 612 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 PKP3Q9Y446 797 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 USP31Q70CQ4 1352 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 SLC25A27O95847 323 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 ARPP19P56211 112 aa9.96□□□□□ -0.82
COL12A1-201ENST00000322507 RAB11FIP2Q7L804 512 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms