RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MLNP12872 115 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 TAF1BQ53T94 588 aaPredicted RBP23.11■■□□□ 1.29
PNKP-201ENST00000322344 DNAJB3Q8WWF6 145 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 HTR3CQ8WXA8 447 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 HNRNPABQ99729 332 aaKnown RBP23.11■■□□□ 1.29
PNKP-201ENST00000322344 FERMT1Q9BQL6 677 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 LNPEPQ9UIQ6 1025 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 MAD1L1Q9Y6D9 718 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 A0A0A0MRY4 1105 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 T-ENOLP0DO92 83 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 SULT1E1P49888 294 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 ARFIP2P53365 341 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 ADAM17P78536 824 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 PLEKHG4Q58EX7 1191 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 UBXN11Q5T124 520 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 DEFB106AQ8N104 65 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 RFWD2Q8NHY2 731 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 SPATA13Q96N96 652 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 EBF2Q9HAK2 575 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 KLK14Q9P0G3 267 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 KANSL3Q9P2N6 904 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 PLLPQ9Y342 182 aa23.11■■□□□ 1.29
PNKP-201ENST00000322344 PDCD11Q14690 1871 aaKnown RBP23.11■■□□□ 1.29
PNKP-201ENST00000322344 ZNF236Q9UL36 1845 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 GLTPD2A6NH11 291 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 STK10O94804 968 aaKnown RBP23.1■■□□□ 1.29
PNKP-201ENST00000322344 AMPD1P23109 780 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 CNTFP26441 200 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 CLNKQ7Z7G1 428 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 MTDHQ86UE4 582 aaKnown RBP23.1■■□□□ 1.29
PNKP-201ENST00000322344 B3GALNT2Q8NCR0 500 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 DUSP16Q9BY84 665 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 ALG13Q9NP73 1137 aaKnown RBP23.1■■□□□ 1.29
PNKP-201ENST00000322344 SMYD2Q9NRG4 433 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 MCM8Q9UJA3 840 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 DCTN4Q9UJW0 460 aa23.1■■□□□ 1.29
PNKP-201ENST00000322344 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.1■■□□□ 1.29
PNKP-201ENST00000322344 SF3B1O75533 1304 aaKnown RBP eCLIP23.1■■□□□ 1.297e-7■■■■■ 86
PNKP-201ENST00000322344 H3BRJ5 948 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 DNAJC6O75061 913 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 RFPL1O75677 317 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 ZNF189O75820 626 aaPredicted RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 GOT1P17174 413 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 BGNP21810 368 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 PSEN2P49810 448 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 OVGP1Q12889 678 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 PIGZQ86VD9 579 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 UTP4Q969X6 686 aaKnown RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 SLC7A6OSQ96CW6 309 aaPredicted RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 EIF2B3Q9NR50 452 aaKnown RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 CRYBB1P53674 252 aaPredicted RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 FKBP1BP68106 108 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 ANKRD20A2Q5SQ80 823 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 ZNF618Q5T7W0 954 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 ANKRD20A1Q5TYW2 823 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 ANKRD20A3Q5VUR7 823 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 TLK2Q86UE8 772 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 LRRN4Q8WUT4 740 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 TMEM40Q8WWA1 233 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 KCTD13Q8WZ19 329 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 RNF19AQ9NV58 838 aa23.09■■□□□ 1.29
PNKP-201ENST00000322344 NOP53Q9NZM5 478 aaKnown RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 RPL26L1Q9UNX3 145 aaKnown RBP23.09■■□□□ 1.29
PNKP-201ENST00000322344 A8MUI8 341 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 HAS3O00219 553 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 CSH1P0DML2 217 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 CSH2P0DML3 217 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 PTPN4P29074 926 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 TKTP29401 623 aaKnown RBP23.08■■□□□ 1.29
PNKP-201ENST00000322344 NOS2P35228 1153 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 LILRA4P59901 499 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 ATG16L1Q676U5 607 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 STEAP4Q687X5 459 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 ZNF449Q6P9G9 518 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 FAM131BQ86XD5 332 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 CCNJLQ8IV13 435 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 RAB3IL1Q8TBN0 382 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 STAMBPL1Q96FJ0 436 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 RNF39Q9H2S5 420 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 ARHGEF4Q9NR80 690 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 STAP1Q9ULZ2 295 aa23.08■■□□□ 1.29
PNKP-201ENST00000322344 SCN4AP35499 1836 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 A0A0G2JND7 137 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 I3L4J1 428 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 OPHN1O60890 802 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 VAV1P15498 845 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 LRPAP1P30533 357 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 MAP2K2P36507 400 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 MRPS5P82675 430 aaKnown RBP23.08■■□□□ 1.28
PNKP-201ENST00000322344 SOX4Q06945 474 aaPredicted RBP23.08■■□□□ 1.28
PNKP-201ENST00000322344 ADIGQ0VDE8 80 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 NBPF20Q3BBV1 942 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 FAM182AQ5T1J6 154 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 TIFABQ6ZNK6 161 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 OSTM1Q86WC4 334 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 NT5C3BQ969T7 300 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 FAM149B1Q96BN6 582 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 MAGEB5Q9BZ81 275 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 MOCS1Q9NZB8 636 aa23.08■■□□□ 1.28
PNKP-201ENST00000322344 HEY2Q9UBP5 337 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms