RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 OAZ1P54368 228 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 C1orf127Q8N9H9 656 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 SLC4A11Q8NBS3 891 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 SKA1Q96BD8 255 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PGBD4Q96DM1 585 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 CDT1Q9H211 546 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 LHX5Q9H2C1 402 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 ERAP1Q9NZ08 941 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 CCDC78A2IDD5 438 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 WDR27A2RRH5 827 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 E7ESA3 106 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 FARP2O94887 1054 aaPredicted RBP10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PROCP04070 461 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 CYP2F1P24903 491 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 GRIA1P42261 906 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 SNX16P57768 344 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 KRT72Q14CN4 511 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 CTC1Q2NKJ3 1217 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 KCNT2Q6UVM3 1135 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 ST13P4Q8IZP2 240 aaPredicted RBP10.86□□□□□ -0.67
COL3A1-202ENST00000317840 USP6NLQ92738 828 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PTCD3Q96EY7 689 aaKnown RBP10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PIWIL1Q96J94 861 aaKnown RBP10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PEBP4Q96S96 227 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 SNRNP25Q9BV90 132 aaKnown RBP10.86□□□□□ -0.67
COL3A1-202ENST00000317840 FRMD8Q9BZ67 464 aaPredicted RBP10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PIDD1Q9HB75 910 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 THAP1Q9NVV9 213 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 PACSIN3Q9UKS6 424 aa10.86□□□□□ -0.67
COL3A1-202ENST00000317840 AP1G2O75843 785 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 ZMPSTE24O75844 475 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 SERPINB9P50453 376 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 GBE1Q04446 702 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 MED21Q13503 144 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 TCHHL1Q5QJ38 904 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 RAPH1Q70E73 1250 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 UNC5BQ8IZJ1 945 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 B3GNT5Q9BYG0 378 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 VCX3BQ9H321 246 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 CYLDQ9NQC7 956 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 IL1RAPL1Q9NZN1 696 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 SLC17A6Q9P2U8 582 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 FOCADQ5VW36 1801 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 C3orf70A6NLC5 250 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 NEMP1O14524 444 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 IL18RAPO95256 599 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 NEK3P51956 506 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 OCRLQ01968 901 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 PDK2Q15119 407 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 CCDC14Q49A88 953 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 TWF2Q6IBS0 349 aaKnown RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 PIWIL2Q8TC59 973 aaKnown RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 NIFKQ9BYG3 293 aaKnown RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 KCNK13Q9HB14 408 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 SLC7A8Q9UHI5 535 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 CCDC189A1A4V9 331 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 M0QZ92 97 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 LGR5O75473 907 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 ETV4P43268 484 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 SLC18A2Q05940 514 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 ITGA9Q13797 1035 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 MMEL1Q495T6 779 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 EFHC1Q5JVL4 640 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 PID1Q7Z2X4 250 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 MPP5Q8N3R9 675 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 NRG4Q8WWG1 115 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 LENG1Q96BZ8 264 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 XYLT2Q9H1B5 865 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 MMADHCQ9H3L0 296 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 RBPJLQ9UBG7 517 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 ADGRA2Q96PE1 1338 aa10.85□□□□□ -0.67
COL3A1-202ENST00000317840 GREB1LQ9C091 1923 aaPredicted RBP10.85□□□□□ -0.67
COL3A1-202ENST00000317840 A6NHS1 94 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 E9PBE3 544 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 H3BRB1 525 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 AIM2O14862 343 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 KLHL41O60662 606 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 GSTA2P09210 222 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 TSHRP16473 764 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 GARSP41250 739 aaKnown RBP10.84□□□□□ -0.67
COL3A1-202ENST00000317840 SLC1A6P48664 564 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 RBP5P82980 135 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 GHRHRQ02643 423 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 ACAP1Q15027 740 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 CA9Q16790 459 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 FAM131BQ86XD5 332 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 DEFB107AQ8IZN7 70 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 CENPKQ9BS16 269 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 TUT1Q9H6E5 874 aaKnown RBP10.84□□□□□ -0.67
COL3A1-202ENST00000317840 HBS1LQ9Y450 684 aaKnown RBP10.84□□□□□ -0.67
COL3A1-202ENST00000317840 ZNF831Q5JPB2 1677 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 TRDMT1O14717 391 aaKnown RBP10.84□□□□□ -0.67
COL3A1-202ENST00000317840 HBP1O60381 514 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 BPGMP07738 259 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 ABCG1P45844 678 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 GRIK3Q13003 919 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 KCNJ11Q14654 390 aa10.84□□□□□ -0.67
COL3A1-202ENST00000317840 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms