RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 MAGEA4P43358 317 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 ATXN1P54253 815 aaKnown RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 PPP2R2AP63151 447 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 PITX1P78337 314 aaPredicted RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 ROR1Q01973 937 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 GALNT2Q10471 571 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 ANKRD22Q5VYY1 191 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 KCTD11Q693B1 232 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 METTL23Q86XA0 190 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 CDKL3Q8IVW4 592 aaPredicted RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 CCDC117Q8IWD4 279 aaPredicted RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 ZNF784Q8NCA9 323 aaPredicted RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 OR2W6PQ8NHA6 318 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 TADA1Q96BN2 335 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 TMEM209Q96SK2 561 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 UNC93B1Q9H1C4 597 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 RABGEF1Q9UJ41 708 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 KBTBD13C9JR72 458 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 E7EVH7 732 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 VAV1P15498 845 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 ACTN2P35609 894 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 BRCC3P46736 316 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 SULT1E1P49888 294 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 MAP3K7CLP57077 242 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 SLC8A3P57103 927 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 CDK16Q00536 496 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 PPIDQ08752 370 aaKnown RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 CEP85LQ5SZL2 805 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 FNBP1LQ5T0N5 605 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 NPNTQ6UXI9 565 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 DSTYKQ6XUX3 929 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 RGS9BPQ6ZS82 235 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 ZNF365Q70YC5 407 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 CAND1Q86VP6 1230 aaKnown RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 RFX6Q8HWS3 928 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 URGCPQ8TCY9 931 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 OVCA2Q8WZ82 227 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 HSPH1Q92598 858 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 HDAC11Q96DB2 347 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 KCNK16Q96T55 309 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 PLEKHA4Q9H4M7 779 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 MKS1Q9NXB0 559 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 PPARGC1AQ9UBK2 798 aaKnown RBP7.44□□□□□ -1.22
NPHP1-201ENST00000316534 BACE2Q9Y5Z0 518 aa7.44□□□□□ -1.22
NPHP1-201ENST00000316534 TCRBV7S3A2A0A539 114 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 TRIM66O15016 1216 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 MCF2LO15068 1137 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 PRPF4O43172 522 aaKnown RBP eCLIP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 LINC00271P0C7V0 271 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 PRKCHP24723 683 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ADCY8P40145 1251 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 CTCFP49711 727 aaPredicted RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 HNRNPH2P55795 449 aaKnown RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 MSS51Q4VC12 460 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 OVOS1Q6IE37 1185 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 GLB1LQ6UWU2 654 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 C4orf50Q6ZRC1 276 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 THEM5Q8N1Q8 247 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 P3H4Q92791 437 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ASIC3Q9UHC3 531 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 PCSK1NQ9UHG2 260 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 NAALADL1Q9UQQ1 740 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 DNAH12Q6ZR08 3092 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 CARNS1A5YM72 827 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 DCDC2CA8MYV0 355 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 F8W810 466 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 PPP1R12AO14974 1030 aaPredicted RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 NCAM2O15394 837 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 IRAK2O43187 625 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 SPAG6O75602 509 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 POMCP01189 267 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 RBP3P10745 1247 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 DESP17661 470 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 GYS2P54840 703 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 WASHC5Q12768 1159 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 SLC8B1Q6J4K2 584 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ADGRD1Q6QNK2 874 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 RFX8Q6ZV50 586 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 BZW1Q7L1Q6 419 aaKnown RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 DENND1AQ8TEH3 1009 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 RNF139Q8WU17 664 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 UBLCP1Q8WVY7 318 aaPredicted RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 MRPL9Q9BYD2 267 aaKnown RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ABCC13Q9NSE7 274 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ETNK2Q9NVF9 386 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 CLIC5Q9NZA1 410 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 SAE1Q9UBE0 346 aaPredicted RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 A0A087WUV0 522 aaPredicted RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 TRAPPC3O43617 180 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 GPS1Q13098 491 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 NR1H3Q13133 447 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 MTA1Q13330 715 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 UBE2Q1Q7Z7E8 422 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 PRUNE1Q86TP1 453 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 EXOC3L1Q86VI1 746 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 NLRP14Q86W24 1093 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ARFGAP2Q8N6H7 521 aa7.43□□□□□ -1.22
NPHP1-201ENST00000316534 ZNF317Q96PQ6 595 aaPredicted RBP7.43□□□□□ -1.22
NPHP1-201ENST00000316534 RBM15Q96T37 977 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms