RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ATP5BP06576 529 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 BRD2P25440 801 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 EPHB2P29323 1055 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 FLT3LGP49771 235 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PDE1BQ01064 536 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 SPARCL1Q14515 664 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 CCL14Q16627 93 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 SLC5A9Q2M3M2 681 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 SOWAHAQ2M3V2 549 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 NBPF20Q3BBV1 942 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 LMBRD2Q68DH5 695 aaPredicted RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 GALNT7Q86SF2 657 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 PALM2Q8IXS6 379 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 LILRA2Q8N149 483 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 CCDC89Q8N998 374 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ISG20Q96AZ6 181 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 ZNF670Q9BS34 389 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 UNC93B1Q9H1C4 597 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 DDX56Q9NY93 547 aaKnown RBP8.13□□□□□ -1.11
CNOT4-201ENST00000315544 FZD10Q9ULW2 581 aa8.13□□□□□ -1.11
CNOT4-201ENST00000315544 TRIM24O15164 1050 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 OGTO15294 1046 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PRR35P0CG20 571 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 AP1B1Q10567 949 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 BNC2Q6ZN30 1099 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 FAM183BPQ6ZVS7 135 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 TP53INP2Q8IXH6 220 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 OTUD6BQ8N6M0 293 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PRPF31Q8WWY3 499 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 SNX27Q96L92 541 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 BTBD2Q9BX70 525 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 NMUR2Q9GZQ4 415 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 GPAMQ9HCL2 828 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 RNF146Q9NTX7 359 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PSMC3IPQ9P2W1 217 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 SLC7A8Q9UHI5 535 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 C2CD2Q9Y426 696 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 SCINQ9Y6U3 715 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 ZFC3H1O60293 1989 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 GFRA2O00451 464 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 GRID2O43424 1007 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PEX1O43933 1283 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 ENTPD5O75356 428 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PIAS1O75925 651 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MLNP12872 115 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 SLCO1A2P46721 670 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 NEDD9Q14511 834 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 TAF1BQ53T94 588 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PM20D1Q6GTS8 502 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 EPGNQ6UW88 154 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 HS2ST1Q7LGA3 356 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 KIF2BQ8N4N8 673 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 RDH13Q8NBN7 331 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 ARRDC4Q8NCT1 418 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 TMEM143Q96AN5 459 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 P2RY11Q96G91 374 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MCEEQ96PE7 176 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MYCBPQ99417 103 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 NPY6RQ99463 290 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 BTBD10Q9BSF8 475 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 TINF2Q9BSI4 451 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 OXCT2Q9BYC2 517 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 SENP6Q9GZR1 1112 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 OCEL1Q9H607 264 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 FBXO6Q9NRD1 293 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 UBAP1Q9NZ09 502 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 IL37Q9NZH6 218 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 DTLQ9NZJ0 730 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 CTTNBP2NLQ9P2B4 639 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 HBS1LQ9Y450 684 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 USH1CQ9Y6N9 552 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MPHOSPH10O00566 681 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 RGS16O15492 202 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 DENRO43583 198 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PSAPP07602 524 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 HOXD10P28358 340 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 DLG1Q12959 904 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 DMP1Q13316 513 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 PDE1CQ14123 709 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 KBTBD12Q3ZCT8 623 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MPZL3Q6UWV2 235 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 NSUN6Q8TEA1 469 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 FBF1Q8TES7 1133 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 DOK1Q99704 481 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 GPATCH1Q9BRR8 931 aaKnown RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 MLPHQ9BV36 600 aaPredicted RBP8.12□□□□□ -1.11
CNOT4-201ENST00000315544 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
CNOT4-201ENST00000315544 TLR3O15455 904 aaKnown RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 RNASEH1O60930 286 aaKnown RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 TM7SF2O76062 418 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 BPGMP07738 259 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 MMP2P08253 660 aa8.11□□□□□ -1.11
CNOT4-201ENST00000315544 VIMP08670 466 aaKnown RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 SOX4Q06945 474 aaPredicted RBP8.11□□□□□ -1.11
CNOT4-201ENST00000315544 NAA25Q14CX7 972 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms