RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 VSTM1Q6UX27 236 aa19.02■□□□□ 0.63
CCDC43-201ENST00000315286 RIBC1Q8N443 379 aaPredicted RBP19.02■□□□□ 0.63
CCDC43-201ENST00000315286 EDEM1Q92611 657 aa19.02■□□□□ 0.63
CCDC43-201ENST00000315286 QKIQ96PU8 341 aaKnown RBP eCLIP19.02■□□□□ 0.63
CCDC43-201ENST00000315286 SLC9A7Q96T83 725 aa19.02■□□□□ 0.63
CCDC43-201ENST00000315286 H3BRJ5 948 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 I6L893 689 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-201ENST00000315286 AMHP03971 560 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 TMED2Q15363 201 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 EFHC2Q5JST6 749 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 PM20D1Q6GTS8 502 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 C3orf62Q6ZUJ4 267 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 NLRC5Q86WI3 1866 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 TDRPQ86YL5 185 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 IGDCC3Q8IVU1 814 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 ATP11CQ8NB49 1132 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 NETO2Q8NC67 525 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 SLAIN1Q8ND83 568 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 OLFM3Q96PB7 478 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 ETNK1Q9HBU6 452 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 DMAP1Q9NPF5 467 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-201ENST00000315286 RABGEF1Q9UJ41 708 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 NR2E3Q9Y5X4 410 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 TMEM120BA0PK00 339 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 GCATO75600 419 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 DGKIO75912 1065 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 TYMPP19971 482 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 GRK4P32298 578 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 DSC1Q08554 894 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 NOMO2Q5JPE7 1267 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 TADA2BQ86TJ2 420 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 PALM2Q8IXS6 379 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 KLC2Q9H0B6 622 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 DDIT4Q9NX09 232 aa19.01■□□□□ 0.63
CCDC43-201ENST00000315286 FAM72CH0Y354 149 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 EBAG9O00559 213 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 MFSD11O43934 449 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 AVILO75366 819 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 METTL18O95568 372 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 BRAFP15056 766 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 TSPY1Q01534 308 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 YWHAHQ04917 246 aaPredicted RBP19■□□□□ 0.63
CCDC43-201ENST00000315286 FAM72AQ5TYM5 149 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 FAM72DQ6L9T8 149 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 FAM72BQ86X60 149 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 SRRM1Q8IYB3 904 aaKnown RBP19■□□□□ 0.63
CCDC43-201ENST00000315286 NTAN1Q96AB6 310 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 MRRFQ96E11 262 aaKnown RBP19■□□□□ 0.63
CCDC43-201ENST00000315286 PGAP3Q96FM1 320 aaPredicted RBP19■□□□□ 0.63
CCDC43-201ENST00000315286 PRMT1Q99873 361 aaKnown RBP19■□□□□ 0.63
CCDC43-201ENST00000315286 FBXW11Q9UKB1 542 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 PCDHB8Q9UN66 801 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 CHMP2BQ9UQN3 213 aa19■□□□□ 0.63
CCDC43-201ENST00000315286 MYO18AQ92614 2054 aaKnown RBP19■□□□□ 0.63
CCDC43-201ENST00000315286 ARHGEF37A1IGU5 675 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 APRTP07741 180 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 PHBP35232 272 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 MAP2K2P36507 400 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 ELK3P41970 407 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 MPP2Q14168 576 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 MAPRE1Q15691 268 aaKnown RBP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 BSPRYQ5W0U4 402 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 HEATR6Q6AI08 1181 aaKnown RBP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 PPP1R21Q6ZMI0 780 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 LRRC8DQ7L1W4 858 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 COLGALT2Q8IYK4 626 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 SCAMP5Q8TAC9 235 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 ZNF296Q8WUU4 475 aaPredicted RBP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 TFB1MQ8WVM0 346 aaKnown RBP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 IRGQQ8WZA9 623 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 LGMNQ99538 433 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 PRDM16Q9HAZ2 1276 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 KCNK9Q9NPC2 374 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 TBC1D13Q9NVG8 400 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 PHF24Q9UPV7 400 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 TTC3P53804 2025 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 C5orf60A6NFR6 353 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 EEF2KO00418 725 aaKnown RBP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 VAV1P15498 845 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 MAGEA6P43360 314 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 OR1G1P47890 313 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 VEGFBP49765 207 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 APLP1P51693 650 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 AIF1P55008 147 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 SCAPQ12770 1279 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 DPYSQ14117 519 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 RFX8Q6ZV50 586 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 AGGF1Q8N302 714 aaeCLIP18.99■□□□□ 0.63
CCDC43-201ENST00000315286 URGCPQ8TCY9 931 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 FBF1Q8TES7 1133 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 RRN3Q9NYV6 651 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 DNAJB4Q9UDY4 337 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 TEX264Q9Y6I9 313 aa18.99■□□□□ 0.63
CCDC43-201ENST00000315286 RASA4BC9J798 803 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 RASA4O43374 803 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 FKTNO75072 461 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 PIAS1O75925 651 aa18.98■□□□□ 0.63
CCDC43-201ENST00000315286 OR4Q2P0C623 313 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms