RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 LYNP07948 512 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 ANKRD12Q6UB98 2062 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 TBKBP1A7MCY6 615 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 MGRN1O60291 552 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 ZNHIT3Q15649 155 aaPredicted RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 TRIM49D1C9J1S8 452 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 RHOBTB3O94955 611 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 CRTAMO95727 393 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 IKBIPQ70UQ0 350 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 PDGFCQ9NRA1 345 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 CBX4O00257 560 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 TIMM44O43615 452 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 MYL12AP19105 171 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 OTUD4Q01804 1114 aaKnown RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 BTG3Q14201 252 aaPredicted RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 ERP44Q9BS26 406 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 SPATA9Q9BWV2 254 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 PRMT7Q9NVM4 692 aaPredicted RBP13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 DSEQ9UL01 958 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
SPTBN2-201ENST00000309996 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 ITGB3P05106 788 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 ANXA5P08758 320 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 FCGR1AP12314 374 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC13A5Q86YT5 568 aaPredicted RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 ATXN3LQ9H3M9 355 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 CXorf56Q9H5V9 222 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 AASDHPPTQ9NRN7 309 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 VAV3Q9UKW4 847 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 EFCAB6Q5THR3 1501 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 BAZ2BQ9UIF8 2168 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 GTPBP1O00178 669 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 POLR2EP19388 210 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 IFNGR2P38484 337 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 IL12RB1P42701 662 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 TAF6P49848 677 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 RHOAP61586 193 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 IL5RAQ01344 420 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SLC29A2Q14542 456 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SHC4Q6S5L8 630 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 CASP12Q6UXS9 341 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 BNC2Q6ZN30 1099 aaPredicted RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 TRPV3Q8NET8 790 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 PI4K2AQ9BTU6 479 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 CYP4F12Q9HCS2 524 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 PDS5AQ29RF7 1337 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SSU72P8A0A1W2PR75 194 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 FAM20BO75063 409 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SNRPFP62306 86 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SPIDRQ14159 915 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 RASGRP2Q7LDG7 609 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 RRAGCQ9HB90 399 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 DPP3Q9NY33 737 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 TRIM64BA6NI03 449 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 GUCY1B2O75343 617 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 SRGNP10124 158 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 RCVRNP35243 200 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 EFEMP1Q12805 493 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 BAATQ14032 418 aaPredicted RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 CCNG2Q16589 344 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 MAGEC3Q8TD91 643 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 C6orf62Q9GZU0 229 aaPredicted RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 ZNF624Q9P2J8 865 aaPredicted RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 NLRP1Q9C000 1473 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 UBA1P22314 1058 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 TKFCQ3LXA3 575 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 FAM220AQ7Z4H9 259 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 EID3Q8N140 333 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 UBASH3BQ8TF42 649 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 INTS7Q9NVH2 962 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 INTS10Q9NVR2 710 aaKnown RBP13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 POMCP01189 267 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 KRT74Q7RTS7 529 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 PROSER1Q86XN7 944 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 UBAP1Q9NZ09 502 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 HEY2Q9UBP5 337 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
SPTBN2-201ENST00000309996 FOSL2P15408 326 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 GLRBP48167 497 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 VAC14Q08AM6 782 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 TMEM26Q6ZUK4 368 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 TAF8Q7Z7C8 310 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 CNPY3Q9BT09 278 aa13.18□□□□□ -0.3
SPTBN2-201ENST00000309996 CDADC1Q9BWV3 514 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms